PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740091.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 403aa MW: 43839.6 Da PI: 6.5895

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740091.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.4	2.9e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl XP_022740091.1 14 KGPWTPEEDQKLLVYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.8	9.1e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l XP_022740091.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MGRSPCCDKV GLKKGPWTPE EDQKLLVYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG 120 IDPITHKPKS DALLSTDGQS KNAANLSHMA QWESARLEAE ARLVRESKIR SHSFQHQLNP 180 PGFASSASAS GSTSASAAQL VNKTAWNSAT GWSKSSEGNS GVLNTALGAA GDLESPTSTL 240 TFSENAPPRN ISTGLGVGSM PMIQFVGTIS GSSQTGIIKE EGEQEWKGLG SSTNLPDYKE 300 GMENSFSFTS SLHDMAISME GGWTPESLRP SSSHVNVGNV MEEGFTNLLL DDSIDRSLSD 360 SGKESDENSG GSGDGSDYYE DNKNYWNSIL NLVNSSPSDS PMF

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MGRSPCCDKV GLKKGPWTPE EDQKLLVYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLAKMG  120
IDPITHKPKS DALLSTDGQS KNAANLSHMA QWESARLEAE ARLVRESKIR SHSFQHQLNP  180
PGFASSASAS GSTSASAAQL VNKTAWNSAT GWSKSSEGNS GVLNTALGAA GDLESPTSTL  240
TFSENAPPRN ISTGLGVGSM PMIQFVGTIS GSSQTGIIKE EGEQEWKGLG SSTNLPDYKE  300
GMENSFSFTS SLHDMAISME GGWTPESLRP SSSHVNVGNV MEEGFTNLLL DDSIDRSLSD  360
SGKESDENSG GSGDGSDYYE DNKNYWNSIL NLVNSSPSDS PMF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	1e-113	MYB family protein