PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022740128.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 555aa    MW: 62605.4 Da    PI: 6.5062
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022740128.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3068.8e-941995543374
            GRAS   3 elLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     e L+++A++++ +dl+laq +Larl+++  sp+g+p+qR+a+yf+eAL++ l++      ++ +++ +s+++ +++++a+k+fs + Pi+ f h+
  XP_022740128.1 199 EELIKAADCFDIHDLQLAQVTLARLNQRlPSPSGRPLQRAAFYFKEALQSLLTG------STRSTRLSSWSEIVQTIKAYKAFSGINPIPMFNHF 287
                     689************************99*************************......777888899999*********************** PP

            GRAS  97 taNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     t+Nqa+lea++g    +HiiDfdi+ G+Q+++L++++a+++ ++   +RiT+v+++e   + e++ ++++L +fA+ l+++f+++++  +++e+l
  XP_022740128.1 288 TTNQALLEALDGPaPLIHIIDFDIGLGGQYASLMREMAEKKdHSCKFIRITAVVPEE--YAIETRLIKDNLFQFAQDLKLRFQIEFVPLRTFEML 380
                     ************97899*********************888466779********66..99999**********************9999***** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adhnsesFlerflealeyysalfdsleaklpreseer 282
                     +++++++  gE++a+ l+ +++r l  s+++    +++L+ +++++P vvv+v++e  ++++++sF + f++ le+y+++f+sl+a + +  e+ 
  XP_022740128.1 381 SFKAFKFIDGEKTAILLSPSIFRCL--SLNV----TAFLSDLRRVNPSVVVFVDSEvwMELGTTSFRKNFVSGLEFYVMMFESLDAAV-AGGEWV 468
                     ************************9..4444....56*******************77788*************************97.666899 PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +k+E  ll+++i  +v ++ ++      t+  Wre +  aG+++++ls++a  qa++ll kv+++g++v +++++lvl+W++ +Lv++SaWr
  XP_022740128.1 469 RKIETLLLRPRILAAVEAAARR------TAPPWRELFVGAGMRAMHLSQFADFQAECLLGKVHVRGFHVVKRQAELVLCWHESALVATSAWR 554
                     9***************998887......89*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 555 aa     Download sequence    
MRVPVTSPQN NHCQSPKHNN NNSSSTTARN ISFLNSVPAA SCYEPTSVLD LRRSPSPVPE  60
KPVSNPADVS NCISVSDPHH LAPLEWDEHE LRNMDWDSII KDLGLDDESV PASKTINPQV  120
LSPCENHIQK LPEFTSCELT NHPVHSDFNN LYDFYSVLYQ NPSHQNFNTT TATNNYLDIS  180
NSCNFHNIGN FNLGFDFLEE LIKAADCFDI HDLQLAQVTL ARLNQRLPSP SGRPLQRAAF  240
YFKEALQSLL TGSTRSTRLS SWSEIVQTIK AYKAFSGINP IPMFNHFTTN QALLEALDGP  300
APLIHIIDFD IGLGGQYASL MREMAEKKDH SCKFIRITAV VPEEYAIETR LIKDNLFQFA  360
QDLKLRFQIE FVPLRTFEML SFKAFKFIDG EKTAILLSPS IFRCLSLNVT AFLSDLRRVN  420
PSVVVFVDSE VWMELGTTSF RKNFVSGLEF YVMMFESLDA AVAGGEWVRK IETLLLRPRI  480
LAAVEAAARR TAPPWRELFV GAGMRAMHLS QFADFQAECL LGKVHVRGFH VVKRQAELVL  540
CWHESALVAT SAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-154GRAS family protein