PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740154.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 225aa MW: 25691.3 Da PI: 8.0879

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740154.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	90.3	1e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeELS+LCda+va+iifsstgkl+ey+s XP_022740154.1 9 KKIDNATSRQVTFSKRRRGLFKKAEELSILCDADVALIIFSSTGKLFEYAS 59 68***********************************************86 PP
2	K-box	43.3	1.6e-15	78	171	13	98
K-box 13 kaeslqqelakLkkeienLq........reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 k e+++ el+ +++ ++++ +++R++ Ge+L+ L+++eLqqLe+ Le +l+++ +kK + ++++i +lq+k +l een++L+ k+ XP_022740154.1 78 KLEQSSLELQLVENSNHSMLtmevaeksHQLRQMRGEELQGLTIEELQQLEKSLEAGLSRVMEKKGQRIMREITDLQRKGMQLMEENERLKLKM 171 4555566666666666655445565555889***********************************************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MAREKIKIKK IDNATSRQVT FSKRRRGLFK KAEELSILCD ADVALIIFSS TGKLFEYASS 60 SMKEILERHN LRSKNLEKLE QSSLELQLVE NSNHSMLTME VAEKSHQLRQ MRGEELQGLT 120 IEELQQLEKS LEAGLSRVME KKGQRIMREI TDLQRKGMQL MEENERLKLK MSNGRRQVAS 180 ESENIIFCEE GRSSESVTNV CTSNGNPHDH ESSDTSLKLG LPYSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	4e-98	MIKC_MADS family protein