PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740204.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 332aa MW: 37657.6 Da PI: 6.5125

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740204.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.5	1.8e-11	154	201	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ + f L l+P + kK++Ka++L ++Y+k+Lq XP_022740204.1 154 QDHVIAERKRREKLSQMFISLSALIPGL-----KKMDKASVLGDSIKYMKQLQ 201 5699**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MEIASGKWLS ELEMGDPTFF PQQQMMNPID YPFDDINFQY FSSESYSSYP NVDQKFSHNN 60 NINGLCIEAN FHQIDDFKRP IKQQIKTTSW NSCITENIPP KAAPSSSSHI ISFDNSNSSA 120 AISQQYYGLD CDEKPKNEVS KRVGSLTRTP LHSQDHVIAE RKRREKLSQM FISLSALIPG 180 LKKMDKASVL GDSIKYMKQL QERVATLEEQ VAKQTVKSVI FVKKTQIYAD DETSSSDENF 240 DSQPNKPFPE IEARVSDKDV LIRIHCEKHK RCISNIINEV EKLHLSVVNS NVLPFGQATL 300 DITIAAKVIS QPFRNSGQEL LFVSSFSIQC FV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	160	165	ERKRRE
2	161	166	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	4e-53	bHLH family protein