PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022740209.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 251aa    MW: 28926.4 Da    PI: 10.0059
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022740209.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF46.74e-151250442
                    -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
          SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                    e +  r +t+ kR +g+ KKA+E S+LCd++v++iif +
  XP_022740209.1 12 EHEKTRATTLKKRMKGLKKKAYEFSILCDVKVCMIIFEP 50
                    667889******************************966 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MARGKLSMKL LEHEKTRATT LKKRMKGLKK KAYEFSILCD VKVCMIIFEP KLKDSPAKVE  60
IWPSDPDQVN SIIDKYKSKA ASDAQKKISI IFHFFSILRR QVHDEVAHVR KANFEAKFPT  120
WNDRIDNFSP EEIASFLTKL DLNLEVENRK TMLMKGDDQH NLMQSXQIKA KSFYYIPAAS  180
HLKNLNHSDK HIQAHLPVEI LNHFDHIKSF PQKNVDFGVI WEQLPPPTKP LNIQLPSLSP  240
TDEALVKLPS A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.12e-14M-type_MADS family protein