PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022740212.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 198aa    MW: 21894.8 Da    PI: 8.2446
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022740212.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF55.76.4e-182360845
                    HHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  8 nrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                     +qv fskRr g++ KA+EL++LC++e a++++s++gk
  XP_022740212.1 23 AQQVAFSKRRSGLFRKASELCTLCAVETALVVYSPSGK 60
                    689*********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MAGLSGKGGR RRAQVLMIQA ADAQQVAFSK RRSGLFRKAS ELCTLCAVET ALVVYSPSGK  60
AFSVGHPRKP DFDAIRRAEA EQEATLNELN KKYHDLLEKL KAEKIRGEQL KQMRMESESQ  120
GQSLVDRPVN ELNLKELLTL KSMMQEFKGK LRMHIQEFSV EPTASTSTSA GETNASLSGS  180
TEGDFPADTR DHDVGHEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.11e-22M-type_MADS family protein