PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740401.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 413aa MW: 45187.7 Da PI: 7.5788

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740401.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.4	8e-16	175	221	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn E+rRR+riN+++ L+ l+P++ K +Ka++L +A+eY+k+Lq XP_022740401.1 175 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 221 6***********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MLLCFSKRNQ KPKRTVTETH EKILKKREAN LKMGDNIKLT TFDSKNNDNN NNYNHGTCLS 60 SSSDDISNLL HQILVHSSSS SSGMAHLAGP TENPLWLSQS PAPPGGRVKQ RMILTVDSCG 120 RGSGGSGNLV GAAGENDTDG YDCQSEEGLE ALVDEAPTKP APSRSSSKRS RAAEVHNLSE 180 KRRRSRINEK MKALQNLIPN SNKTDKASML DEAIEYLKQL QLQVQLLSMR NGLSLHPMCL 240 PGVLQPIQFS QTRMDFGEEK GSLPMNVSGT VPANQETSAQ LGFDLPNQCS SSNPASVPNM 300 SNVITSETSF GLESIQSQFG PFQLLSSSQD ICREDILPRD QLRTKISEFG SAAINTVSLR 360 FNTRESDLKD SGSIDASMMR RNQSNSVLLK NMEHDLILSP HLTGPHAQNH SII

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MLLCFSKRNQ KPKRTVTETH EKILKKREAN LKMGDNIKLT TFDSKNNDNN NNYNHGTCLS  60
SSSDDISNLL HQILVHSSSS SSGMAHLAGP TENPLWLSQS PAPPGGRVKQ RMILTVDSCG  120
RGSGGSGNLV GAAGENDTDG YDCQSEEGLE ALVDEAPTKP APSRSSSKRS RAAEVHNLSE  180
KRRRSRINEK MKALQNLIPN SNKTDKASML DEAIEYLKQL QLQVQLLSMR NGLSLHPMCL  240
PGVLQPIQFS QTRMDFGEEK GSLPMNVSGT VPANQETSAQ LGFDLPNQCS SSNPASVPNM  300
SNVITSETSF GLESIQSQFG PFQLLSSSQD ICREDILPRD QLRTKISEFG SAAINTVSLR  360
FNTRESDLKD SGSIDASMMR RNQSNSVLLK NMEHDLILSP HLTGPHAQNH SII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	3e-45	bHLH family protein