PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740435.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 601aa MW: 64758.2 Da PI: 8.0861

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740435.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.6	2.5e-24	222	266	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e XP_022740435.1 222 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHINRGRHRSRKPVEG 266 79****************************************985 PP
2	QLQ	56.7	7.1e-20	152	186	1	35
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 ++FT++Q+ +L++Q+l+yKyL +n+PvP++Ll ++ XP_022740435.1 152 GPFTPSQWIELEHQALIYKYLTSNVPVPSNLLIPL 186 59******************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MDFEVLGLEG IVVPGNGTLS QTRPPPPPFL SAEAKPKIVG SGFSKQERSS DSAEDHWKSS 60 KLPRTHDLST PNAMPLHQGT PLLRSNSLVS ACTHQQEHIL SLSSLKSEVS FISKDGGFSY 120 YQHTPSMYNR NAGYGSGSLN ASMHGPLTGV RGPFTPSQWI ELEHQALIYK YLTSNVPVPS 180 NLLIPLNKPL YPYGLSSSSA GSLPPNSLGW GSFHLGYSGS TDPEPGRCRR TDGKKWRCSR 240 DAVADQKYCE RHINRGRHRS RKPVEGQTGH AASGTTNSKV MPMSSSMSAS VMTSGGASNC 300 LTIAQQPQFK NLQSGAANPS ADTLVNRLFL KIEGVHGRIQ DPRGLSVMSS ATNLKSNNST 360 FTITKQGIPF AEPSRSDFGL VAFDSLVNPS HGSSYMNSKE YGPFLDFTDQ ETQDQNTLRQ 420 FIEDWPQDQS SRSVITWPEE LKSDWTQLSM SIPMASSEFS SSSSSPAQEK LALSPLRLSR 480 EFDPIQMGLG VNSDISYQNQ KQANWIPISW GSSMGGPLGE VLTNTTSNVG SCKNSSVLSL 540 LSEGWDGSPQ LGSSPTGVLQ KAPFGSLSNS SSGSSPIAEN KKPNNGVSLC EDVLGSTRSL 600 L

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MDFEVLGLEG IVVPGNGTLS QTRPPPPPFL SAEAKPKIVG SGFSKQERSS DSAEDHWKSS  60
KLPRTHDLST PNAMPLHQGT PLLRSNSLVS ACTHQQEHIL SLSSLKSEVS FISKDGGFSY  120
YQHTPSMYNR NAGYGSGSLN ASMHGPLTGV RGPFTPSQWI ELEHQALIYK YLTSNVPVPS  180
NLLIPLNKPL YPYGLSSSSA GSLPPNSLGW GSFHLGYSGS TDPEPGRCRR TDGKKWRCSR  240
DAVADQKYCE RHINRGRHRS RKPVEGQTGH AASGTTNSKV MPMSSSMSAS VMTSGGASNC  300
LTIAQQPQFK NLQSGAANPS ADTLVNRLFL KIEGVHGRIQ DPRGLSVMSS ATNLKSNNST  360
FTITKQGIPF AEPSRSDFGL VAFDSLVNPS HGSSYMNSKE YGPFLDFTDQ ETQDQNTLRQ  420
FIEDWPQDQS SRSVITWPEE LKSDWTQLSM SIPMASSEFS SSSSSPAQEK LALSPLRLSR  480
EFDPIQMGLG VNSDISYQNQ KQANWIPISW GSSMGGPLGE VLTNTTSNVG SCKNSSVLSL  540
LSEGWDGSPQ LGSSPTGVLQ KAPFGSLSNS SSGSSPIAEN KKPNNGVSLC EDVLGSTRSL  600
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	1e-114	GRF family protein