PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740491.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 230aa MW: 25305.9 Da PI: 8.5044

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740491.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	98.1	9.1e-31	2	103	1	97
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +C++C+vlr++C++ C+l+p++ p++q +++ +v+k+FG+s ++++++a+pe++r+++++sl++eA+ r+ +Pv+Gavg++++++++ +q+ XP_022740491.1 2 SCNGCRVLRKGCSEFCILRPCLqwiqsPEAQGHATIFVAKFFGRSGLMSFISAVPESQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHTCQA 96 6********************************************************************************************** PP DUF260 91 kaelall 97 ++e++l+ XP_022740491.1 97 AVETVLR 103 *998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MSCNGCRVLR KGCSEFCILR PCLQWIQSPE AQGHATIFVA KFFGRSGLMS FISAVPESQR 60 PALFQSLLFE ACGRTVNPVN GAVGLLWTGN WHTCQAAVET VLRGGTLRAM PELMSPTPSS 120 DEASEATCTD MWKLQETATN LNSNCRFSNI RSKVSPKRNR VEEFKKVQPS NLDLCFTPSF 180 TGKRVPDNRR PGTPSMNSEE SVTTTCFESG FADQHGQGKG ADKKLLNLFV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49940.1	5e-91	LBD family protein