PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740530.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 276aa MW: 31200.1 Da PI: 6.794

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740530.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.5	4.7e-18	75	127	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe +++ e++ +LAk lgL+ rq+ +WFqNrRa++k XP_022740530.1 75 KKRLNLEQVKALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWK 127 4568889*********************************************9 PP
2	HD-ZIP_I/II	127.8	4.5e-41	73	164	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl+ eqvk+LE+sFe +kLeperK++la++Lglqprq+a+WFqnrRAR+ktkqlEkdy++Lk++++alk++n++L++++++L ++l XP_022740530.1 73 EKKKRLNLEQVKALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKKKFEALKADNDALQAQNKKLSAQLL 164 69**************************************************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MAFPPHAFMF QPHEDHNDHL PSPTSLLPSC PPQLFHGGAP FMVKRSVSFS GVDKSEEVHG 60 DDELSDDGSN LGEKKKRLNL EQVKALEKSF ELGNKLEPER KMQLAKALGL QPRQIAIWFQ 120 NRRARWKTKQ LEKDYDVLKK KFEALKADND ALQAQNKKLS AQLLSLKTKD SNEISIKKEN 180 EGSWSDGSDN SCDVNLDISR TTVINGTPSS QLSSKHLFPS SIRPASMTQL LQGSSRPDLQ 240 CPKLDQVVQE ESFCHMFNGV DEQQGFWPWG EQQNFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	122	130	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01220.1	3e-87	HD-ZIP family protein