PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740541.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 331aa MW: 36609.9 Da PI: 7.063

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	139	1.7e-43	27	126	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC+++Cv+apyfp ++p+kfanvhk+FGasnv kll++l+ ++reda++sl+yeAear+rdPvyG+vg+i+ lq++l+q++++l+ XP_022740541.1 27 PCAACKFLRRKCTQECVFAPYFPPDNPQKFANVHKVFGASNVAKLLNELNASQREDAVNSLAYEAEARLRDPVYGCVGLISILQHRLKQVQHDLS 121 7********************************************************************************************** PP DUF260 96 llkee 100 +k+e XP_022740541.1 122 NAKKE 126 99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MNIDDLGSFH FSLIRRQKEE MSSSNSPCAA CKFLRRKCTQ ECVFAPYFPP DNPQKFANVH 60 KVFGASNVAK LLNELNASQR EDAVNSLAYE AEARLRDPVY GCVGLISILQ HRLKQVQHDL 120 SNAKKELATY IGPQAMLPIL QPPVFLQQHV GNASSAVMQH NMMPMMGIPT AAAAASASHG 180 GQLVIREPQQ QQIFEAQQQL AAVVAAREQQ EMFRGYEQHH QGQQQQEIVR FNGGFEGAAS 240 VTGTGFNQIT TAATMSSSLA LGSFDNPYQI QTQQEDHPHH HSHGGHPLQA QLLLQPQQGQ 300 PQQNQQQQSQ QNQQQQQQRS GSEEGRSIGP C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	5e-90	LBD family protein