PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740542.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 311aa MW: 34192.2 Da PI: 7.202

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740542.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	139.1	1.5e-43	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC+++Cv+apyfp ++p+kfanvhk+FGasnv kll++l+ ++reda++sl+yeAear+rdPvyG+vg+i+ lq++l+q++++l+ XP_022740542.1 7 PCAACKFLRRKCTQECVFAPYFPPDNPQKFANVHKVFGASNVAKLLNELNASQREDAVNSLAYEAEARLRDPVYGCVGLISILQHRLKQVQHDLS 101 7********************************************************************************************** PP DUF260 96 llkee 100 +k+e XP_022740542.1 102 NAKKE 106 99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MSSSNSPCAA CKFLRRKCTQ ECVFAPYFPP DNPQKFANVH KVFGASNVAK LLNELNASQR 60 EDAVNSLAYE AEARLRDPVY GCVGLISILQ HRLKQVQHDL SNAKKELATY IGPQAMLPIL 120 QPPVFLQQHV GNASSAVMQH NMMPMMGIPT AAAAASASHG GQLVIREPQQ QQIFEAQQQL 180 AAVVAAREQQ EMFRGYEQHH QGQQQQEIVR FNGGFEGAAS VTGTGFNQIT TAATMSSSLA 240 LGSFDNPYQI QTQQEDHPHH HSHGGHPLQA QLLLQPQQGQ PQQNQQQQSQ QNQQQQQQRS 300 GSEEGRSIGP C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	2e-90	LBD family protein