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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_022740586.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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| Family | B3 | ||||||||
| Protein Properties | Length: 444aa MW: 50204.1 Da PI: 6.9825 | ||||||||
| Description | B3 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | B3 | 66.1 | 5e-21 | 18 | 108 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
f k l++s+v++ ++ lp f++ h +++++t+tledesg ++ vk+ ++ + l++GW++F++a++L egD++vF+l++ ++f +v
XP_022740586.1 18 FAKSLVRSHVGSCFWMGLPGMFCRVHL--PRKDTTITLEDESGHQFHVKY--YAHKTG--LSAGWRQFCSAHNLLEGDVLVFQLVEPTKF--KVY 104
889********************9995..45788****************..666544..9**********************9876666..999 PP
EE-S CS
B3 96 vfrk 99
++r+
XP_022740586.1 105 IIRA 108
9886 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 444 aa Download sequence |
MIRAEEVQSN LEPEFPSFAK SLVRSHVGSC FWMGLPGMFC RVHLPRKDTT ITLEDESGHQ 60 FHVKYYAHKT GLSAGWRQFC SAHNLLEGDV LVFQLVEPTK FKVYIIRAND LTELDGALGL 120 LNLDAHTKQS DADDAENDTT VFRSTKRKRP NSLPLADVQK KNKRSGLQRL ACNIGMLAEQ 180 SKNAHTKQSD ADDAERDTTV FRSIKRKRPI SLSLVVVQKK NKRSGLQRLA CNIGIPAEQS 240 ENDSEEVGSE VWEGFKQSVP TIQFKDITSF ENFKILVDGL VIDSELSEDI RIKYYKLCCS 300 QNSFLHENII QGINFKLIVG TILETVNISD AIRACKLTTS RDEFDGWDKT LKAFELLGMN 360 VGFLLTRLRR LVNLAFESAG AADTRRYIEA QTEQAQTQDE IRNLEAKLAE LKGACKTFGV 420 EIESLQSKAE TYKLRFEEEV KAPW |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G19184.1 | 1e-35 | B3 family protein | ||||




