PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740659.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 673aa MW: 75978.3 Da PI: 5.695

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740659.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	120.2	9.9e-38	146	221	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv+gCead+se+k yhrrh+vC ++++++vl++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr+k XP_022740659.1 146 RCQVPGCEADISELKGYHRRHRVCLGCANSSTVLIDGETKRYCQQCGKFHLLSDFDEGKRSCRRKLERHNNRRRRK 221 6************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence
MEQVSSPPTQ TSPGSRWSED PEMDVHLPVT EADPASSFWD WGDLLDFTVD DHFSIFFEDE 60 NLSPSPLEAP VPAPAPDPDL DPDPVPGSDR VRKRDPRMIC SNFLASRVPC ACPEIDAQIE 120 KLEEEEAGVP GKKRARTGRI GLGTYRCQVP GCEADISELK GYHRRHRVCL GCANSSTVLI 180 DGETKRYCQQ CGKFHLLSDF DEGKRSCRRK LERHNNRRRR KPVGSKTTVN KESQGAVQSE 240 DIACDGEAGK DDLSLSGPMA EEEPAFESED RLVSAHCSAP MLQSVNNNSV VALIETEMDG 300 GKDDSKFSIS TSYCDNKTSY SSMCPTGRIS FKLYDWNPAE FPRRLRHQIF QWLANMPVEL 360 EGYVRPGCTI LTVFISMPMN IWMKLSENPM TYMHDFVFTP GRMLYGRGFM TIYLNNMIFR 420 TRKDGTSMVK IDVEVQAPRL HYVHPACFEA GKPMEFVACG SNLLQPKFQF LVSFAGRYLP 480 YDYCVATTHV QSKEDFPSCD HRLYKICVPQ TEPDLFGPAF IEVENQSGLS NFIPVLIGDK 540 EVCSEMKSIR QRFDASLSQE ESKFSPNGSL LEACEVSTLR QRAYSELVLD IAWLLREPKL 600 ENFREIMASS QIQRFNCLLS FLIQSESTVI LKKVLPNLKI VVETTGFNGT NDSDIRVHQT 660 RKKLVFSKQL QKG

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence

MEQVSSPPTQ TSPGSRWSED PEMDVHLPVT EADPASSFWD WGDLLDFTVD DHFSIFFEDE  60
NLSPSPLEAP VPAPAPDPDL DPDPVPGSDR VRKRDPRMIC SNFLASRVPC ACPEIDAQIE  120
KLEEEEAGVP GKKRARTGRI GLGTYRCQVP GCEADISELK GYHRRHRVCL GCANSSTVLI  180
DGETKRYCQQ CGKFHLLSDF DEGKRSCRRK LERHNNRRRR KPVGSKTTVN KESQGAVQSE  240
DIACDGEAGK DDLSLSGPMA EEEPAFESED RLVSAHCSAP MLQSVNNNSV VALIETEMDG  300
GKDDSKFSIS TSYCDNKTSY SSMCPTGRIS FKLYDWNPAE FPRRLRHQIF QWLANMPVEL  360
EGYVRPGCTI LTVFISMPMN IWMKLSENPM TYMHDFVFTP GRMLYGRGFM TIYLNNMIFR  420
TRKDGTSMVK IDVEVQAPRL HYVHPACFEA GKPMEFVACG SNLLQPKFQF LVSFAGRYLP  480
YDYCVATTHV QSKEDFPSCD HRLYKICVPQ TEPDLFGPAF IEVENQSGLS NFIPVLIGDK  540
EVCSEMKSIR QRFDASLSQE ESKFSPNGSL LEACEVSTLR QRAYSELVLD IAWLLREPKL  600
ENFREIMASS QIQRFNCLLS FLIQSESTVI LKKVLPNLKI VVETTGFNGT NDSDIRVHQT  660
RKKLVFSKQL QKG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	208	220	RRKLERHNNRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.2	0.0	SBP family protein