PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022740695.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 511aa    MW: 57487.2 Da    PI: 5.2325
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022740695.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS339.65.5e-1041235102374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lLle A+a+++++  ++q+l++ l+el+sp+gd+ q+l +yf++AL +r+++s++++y++l++ ++++ + +++ +++  f+evsP+ +f+h+
  XP_022740695.1 123 TDLLLETATAIADRNSGRVQQLMWMLNELSSPYGDTDQKLGSYFLQALFSRMTDSGERCYRTLASVSEKTCSFESTRKMVLKFQEVSPWTTFGHV 217
                     579************************************************************8888876665555555556************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...............skeeleetgerLakfAeelgvpf 176
                     ++N aI+ea++ge+ +HiiD++ ++++QWp+Ll+aLa+R++++p+lR+T+++++++g                ++ ++e+g+r++kfA+ +gvpf
  XP_022740695.1 218 ACNGAIMEAFDGESNLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTIVASKNGgvsgtsgaaagglaaVQKVMKEIGNRMEKFARLMGVPF 312
                     *****************************************************99889*************9999******************** PP

            GRAS 177 efnvlvak.rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysa 266
                     +fnv+++  +l dl+l+eL++k++Eala+n++  lh++     +++++rd +++ + +l+P++++vve+ea+++ +    +F+++f e+l+++ +
  XP_022740695.1 313 KFNVIHHAgDLCDLDLSELDIKEEEALAINCIGTLHSIT----AVDNRRDIMISNFGRLQPRIITVVEEEAELDVGvdglEFVTGFQECLRWFRV 403
                     *****7777*****************************8....77888999*******************8875444455*************** PP

            GRAS 267 lfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg.yrveeesgslvl 360
                      f++l+++++r+s+er ++Er+  gr iv++vac+ +e++er+e + +W++r++++GF+p+ ls+++  ++++llr++k +g  + ++ ++ ++l
  XP_022740695.1 404 YFEALDESFARTSNERLMLERA-AGRGIVDLVACAPSESIERRELATRWSNRFHASGFSPLVLSDEVCGDVRALLRRYK-EGwSMAQCPDAGIFL 496
                     **********************.********************************************************.66255568899999* PP

            GRAS 361 gWkdrpLvsvSaWr 374
                      Wkd+p+v++SaWr
  XP_022740695.1 497 SWKDQPVVWASAWR 510
                     *************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    
MDTLFRLVSL QSSDQSFNSS RTSSSSRSPR QNHHYQQEDE GCYNFYMDEE DFSSSSSKHY  60
YPYHHQQQQQ HQTHPSTTTT TPTTTTTNIS TPTTHHAFET SDFSTNFSPS RDLNFDFSGK  120
WATDLLLETA TAIADRNSGR VQQLMWMLNE LSSPYGDTDQ KLGSYFLQAL FSRMTDSGER  180
CYRTLASVSE KTCSFESTRK MVLKFQEVSP WTTFGHVACN GAIMEAFDGE SNLHIIDISN  240
TYCTQWPTLL EALATRTDET PHLRLTTIVA SKNGGVSGTS GAAAGGLAAV QKVMKEIGNR  300
MEKFARLMGV PFKFNVIHHA GDLCDLDLSE LDIKEEEALA INCIGTLHSI TAVDNRRDIM  360
ISNFGRLQPR IITVVEEEAE LDVGVDGLEF VTGFQECLRW FRVYFEALDE SFARTSNERL  420
MLERAAGRGI VDLVACAPSE SIERRELATR WSNRFHASGF SPLVLSDEVC GDVRALLRRY  480
KEGWSMAQCP DAGIFLSWKD QPVVWASAWR P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein