PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740702.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 326aa MW: 36483.7 Da PI: 8.0046

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740702.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.6	5.3e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd lv +++++G+g+Wk+++ g+ R+ k+c++rw +yl XP_022740702.1 14 KGSWTPEEDIALVSYIQEHGPGNWKAVPTNTGLFRCSKSCRLRWTNYL 61 799*******************************************97 PP
2	Myb_DNA-binding	49.6	9.3e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l XP_022740702.1 67 RGNFTEHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MGRPPCCDKA GMKKGSWTPE EDIALVSYIQ EHGPGNWKAV PTNTGLFRCS KSCRLRWTNY 60 LRPGIKRGNF TEHEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLKKLQ 120 DREGYSRDGL SSAAAASSHQ ISRGQWERRL QTDIHMAKQA LSDALSPEKP SGLVELKPSN 180 GYISYAKPGS YASSTENIAK LLKGWMRNPS KPASTNSAAT QQSFDNKGGN DSASIEGTPR 240 QEDKSSMEMS EAFESLLMFE SLDSSNSDFS QSMSPDASLF EDESKPDRNA QGKLSLLEKW 300 LFDEGSNQGK DHHLSHIMID ENANFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28910.1	1e-111	MYB family protein