PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740937.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 334aa MW: 37112.8 Da PI: 6.1781

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740937.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.8	6e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lv+++++ G g+W++ ++ g++R++k+c++rw +yl XP_022740937.1 14 KGPWTPEEDEKLVKYIHENGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.3	3.1e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+ +++++ lG++ W++Ia++++ gRt++++k++w+++l XP_022740937.1 67 RGKFSQEEERTILNLHSILGNK-WSAIASHLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MGRSPSSDES GLKKGPWTPE EDEKLVKYIH ENGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SQEEERTILN LHSILGNKWS AIASHLPGRT DNEIKNFWNT HLKKKLIQMG 120 IDPMTHRPRT DIFSSLPHLI ALANLKELMD QHPWEEQAIR LQAEAVEMAK LQCLQYLLQT 180 PASISSGSNN THNTFADMET INLSNSLSPI KDNSALTTSQ LDLAAASLQG FNDSIPFPRL 240 PDLQIPCEYR TCTSKDTAQA QEYTVLSQGE NTCNSPWLTS SATPSPSVIP SVTETLVNSL 300 LGDASCSSSY GGAAPSVWPD DQLLFEDPLF HELS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10280.1	1e-107	MYB family protein