PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740951.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 1186aa MW: 132457 Da PI: 9.2726

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740951.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.9	3.6e-11	48	83	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e++++a +++G++ Wk++a ++ +R+ +++ XP_022740951.1 48 QWTKEELERFYEAYRKYGKD-WKKVATMVR-NRSVEMV 83 6***************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1186 aa Download sequence
MAPSRKPKIA NKKFSYVNEV ASSKDGDSNS AKKSGQRKRK LSDMLGPQWT KEELERFYEA 60 YRKYGKDWKK VATMVRNRSV EMVEALYTMN RAYLSLPEGT ASVVGLIAMM TDHYCVMGGS 120 DSEQESNEGM GASRKPQKRS RVKVRDQPSK SVDKPLPDLL QFHSSTSSYG CLPLLKRRRS 180 ESRPRAVGKR TPRVPISFSH DKNKGERYFS PIRQGVKPKV DAVVDDVAHE IALALTKASQ 240 RGGSPQVSRT PNRKAETPSP VLNNERTNAE TETTSAKIHG SEVDEDACEL SLGSTEADNA 300 DYARDKNYSR NIEGTGTVEV EQKGKRYYRR KPEVEESVNN HPEDTKEACS GTEEGQKLCD 360 FKGKFDAEVA DAKTSRASIK GPRKRSKKVL FGGVEDTSFD ALQTLADLSL MMPETAADTE 420 SSVQFKEEKN EVVEKSKLKG NHPVPGAKGT ASKTSKQGKL FGHDVHAIPE AKEETHPGNV 480 GMRKRRQKSL PYKMQILKDE TDADSHLGES PNFEASDEVK NLQSKGKRSN NVAHSKQGKS 540 VRPPEHTSSS TDHGRDLKNS APSTIQVSSV NQVNLPTKVR SKRKMNAQKP VIGKDIKSSD 600 NIVKGKFSVP VMLFHDRALN LKEKLCSFLS SYQARRWCAF EWFYSTIDYP WFAKREFVEY 660 LDHVGLGHVP RLTRVEWGVI RSSLGKPRRF SEQFLKEERE KLNQYRESVR THYAELRAGI 720 GEGLPTDLAR PLSVGQRVIA VHPKTREIHD GSVLIVDHSR YRIQFDNPEL GVEFVMDIDC 780 MPLYLFENLP ASLLRQNAAI SKFAENYNEL KMNGQPKESK IEEKIKFTQY DNLENANSPS 840 RTSFSTFNVG SFSHPVKVDS SSPNLQLKVG PIEPVYAQQA ANSQPSALAL VQAREADVEA 900 LSQLTRALDK KEALVSELRR MNDEVLESQK GGDNYIKDSD SFKKQYAAVL FQLNEVNEQV 960 SSALFCLRQR NTYPGTSSVR LLKPLVKIGD HGCQLSSFDH SMHHVQESIS HVADIVESSR 1020 LKARSMVDAA MQAMSTLRKG GKSIERIEDA IDFVNNQLSV DEFSVPAPRS STPIDSVHST 1080 VTCLDHQTAC VSHPLALSHI PDKKLQNLSD QDDLRIPSDL IAHCVATLLM IQKCTERQFP 1140 PGDVAQVLDS AVTSLKPCCS QNLPIYTEIQ KCMGIIRNQI LALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1186 aa Download sequence

MAPSRKPKIA NKKFSYVNEV ASSKDGDSNS AKKSGQRKRK LSDMLGPQWT KEELERFYEA  60
YRKYGKDWKK VATMVRNRSV EMVEALYTMN RAYLSLPEGT ASVVGLIAMM TDHYCVMGGS  120
DSEQESNEGM GASRKPQKRS RVKVRDQPSK SVDKPLPDLL QFHSSTSSYG CLPLLKRRRS  180
ESRPRAVGKR TPRVPISFSH DKNKGERYFS PIRQGVKPKV DAVVDDVAHE IALALTKASQ  240
RGGSPQVSRT PNRKAETPSP VLNNERTNAE TETTSAKIHG SEVDEDACEL SLGSTEADNA  300
DYARDKNYSR NIEGTGTVEV EQKGKRYYRR KPEVEESVNN HPEDTKEACS GTEEGQKLCD  360
FKGKFDAEVA DAKTSRASIK GPRKRSKKVL FGGVEDTSFD ALQTLADLSL MMPETAADTE  420
SSVQFKEEKN EVVEKSKLKG NHPVPGAKGT ASKTSKQGKL FGHDVHAIPE AKEETHPGNV  480
GMRKRRQKSL PYKMQILKDE TDADSHLGES PNFEASDEVK NLQSKGKRSN NVAHSKQGKS  540
VRPPEHTSSS TDHGRDLKNS APSTIQVSSV NQVNLPTKVR SKRKMNAQKP VIGKDIKSSD  600
NIVKGKFSVP VMLFHDRALN LKEKLCSFLS SYQARRWCAF EWFYSTIDYP WFAKREFVEY  660
LDHVGLGHVP RLTRVEWGVI RSSLGKPRRF SEQFLKEERE KLNQYRESVR THYAELRAGI  720
GEGLPTDLAR PLSVGQRVIA VHPKTREIHD GSVLIVDHSR YRIQFDNPEL GVEFVMDIDC  780
MPLYLFENLP ASLLRQNAAI SKFAENYNEL KMNGQPKESK IEEKIKFTQY DNLENANSPS  840
RTSFSTFNVG SFSHPVKVDS SSPNLQLKVG PIEPVYAQQA ANSQPSALAL VQAREADVEA  900
LSQLTRALDK KEALVSELRR MNDEVLESQK GGDNYIKDSD SFKKQYAAVL FQLNEVNEQV  960
SSALFCLRQR NTYPGTSSVR LLKPLVKIGD HGCQLSSFDH SMHHVQESIS HVADIVESSR  1020
LKARSMVDAA MQAMSTLRKG GKSIERIEDA IDFVNNQLSV DEFSVPAPRS STPIDSVHST  1080
VTCLDHQTAC VSHPLALSHI PDKKLQNLSD QDDLRIPSDL IAHCVATLLM IQKCTERQFP  1140
PGDVAQVLDS AVTSLKPCCS QNLPIYTEIQ KCMGIIRNQI LALVPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	204	KRRRSESRPRAVGKRTPRVPISFSHDKNK
2	482	487	MRKRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein