PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740959.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 1184aa MW: 132197 Da PI: 9.2726

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.9	3.6e-11	48	83	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e++++a +++G++ Wk++a ++ +R+ +++ XP_022740959.1 48 QWTKEELERFYEAYRKYGKD-WKKVATMVR-NRSVEMV 83 6***************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1184 aa Download sequence
MAPSRKPKIA NKKFSYVNEV ASSKDGDSNS AKKSGQRKRK LSDMLGPQWT KEELERFYEA 60 YRKYGKDWKK VATMVRNRSV EMVEALYTMN RAYLSLPEGT ASVVGLIAMM TDHYCVMGGS 120 DSEQESNEGM GASRKPQKRS RVKVRDQPSK SVDKPLPDLL QFHSSTSSYG CLPLLKRRRS 180 ESRPRAVGKR TPRVPISFSH DKNKGERYFS PIRQGVKPKV DAVVDDVAHE IALALTKASQ 240 RGGSPQVSRT PNRKAETPSP VLNNERTNAE TETTSAKIHG SEVDEDACEL SLGSTEADNA 300 DYARDKNYSR NIEGTGTVEV EQKGKRYYRR KPEVEESVNN HPEDTKEACS GTEEGQKLCD 360 FKGKFDAEVA DAKTSRASIK GPRKRSKKVL FGGVEDTSFD ALQTLADLSL MMPETAADTE 420 SSVQFKEEKN EVVEKSKLKG NHPVPGAKGT ASKTSKQGKL FGHDVHAIPE AKEETHPGNV 480 GMRKRRQKSL PYKILKDETD ADSHLGESPN FEASDEVKNL QSKGKRSNNV AHSKQGKSVR 540 PPEHTSSSTD HGRDLKNSAP STIQVSSVNQ VNLPTKVRSK RKMNAQKPVI GKDIKSSDNI 600 VKGKFSVPVM LFHDRALNLK EKLCSFLSSY QARRWCAFEW FYSTIDYPWF AKREFVEYLD 660 HVGLGHVPRL TRVEWGVIRS SLGKPRRFSE QFLKEEREKL NQYRESVRTH YAELRAGIGE 720 GLPTDLARPL SVGQRVIAVH PKTREIHDGS VLIVDHSRYR IQFDNPELGV EFVMDIDCMP 780 LYLFENLPAS LLRQNAAISK FAENYNELKM NGQPKESKIE EKIKFTQYDN LENANSPSRT 840 SFSTFNVGSF SHPVKVDSSS PNLQLKVGPI EPVYAQQAAN SQPSALALVQ AREADVEALS 900 QLTRALDKKE ALVSELRRMN DEVLESQKGG DNYIKDSDSF KKQYAAVLFQ LNEVNEQVSS 960 ALFCLRQRNT YPGTSSVRLL KPLVKIGDHG CQLSSFDHSM HHVQESISHV ADIVESSRLK 1020 ARSMVDAAMQ AMSTLRKGGK SIERIEDAID FVNNQLSVDE FSVPAPRSST PIDSVHSTVT 1080 CLDHQTACVS HPLALSHIPD KKLQNLSDQD DLRIPSDLIA HCVATLLMIQ KCTERQFPPG 1140 DVAQVLDSAV TSLKPCCSQN LPIYTEIQKC MGIIRNQILA LVPT

Sequence ? help Back to Top

Protein Sequence Length: 1184 aa Download sequence

MAPSRKPKIA NKKFSYVNEV ASSKDGDSNS AKKSGQRKRK LSDMLGPQWT KEELERFYEA  60
YRKYGKDWKK VATMVRNRSV EMVEALYTMN RAYLSLPEGT ASVVGLIAMM TDHYCVMGGS  120
DSEQESNEGM GASRKPQKRS RVKVRDQPSK SVDKPLPDLL QFHSSTSSYG CLPLLKRRRS  180
ESRPRAVGKR TPRVPISFSH DKNKGERYFS PIRQGVKPKV DAVVDDVAHE IALALTKASQ  240
RGGSPQVSRT PNRKAETPSP VLNNERTNAE TETTSAKIHG SEVDEDACEL SLGSTEADNA  300
DYARDKNYSR NIEGTGTVEV EQKGKRYYRR KPEVEESVNN HPEDTKEACS GTEEGQKLCD  360
FKGKFDAEVA DAKTSRASIK GPRKRSKKVL FGGVEDTSFD ALQTLADLSL MMPETAADTE  420
SSVQFKEEKN EVVEKSKLKG NHPVPGAKGT ASKTSKQGKL FGHDVHAIPE AKEETHPGNV  480
GMRKRRQKSL PYKILKDETD ADSHLGESPN FEASDEVKNL QSKGKRSNNV AHSKQGKSVR  540
PPEHTSSSTD HGRDLKNSAP STIQVSSVNQ VNLPTKVRSK RKMNAQKPVI GKDIKSSDNI  600
VKGKFSVPVM LFHDRALNLK EKLCSFLSSY QARRWCAFEW FYSTIDYPWF AKREFVEYLD  660
HVGLGHVPRL TRVEWGVIRS SLGKPRRFSE QFLKEEREKL NQYRESVRTH YAELRAGIGE  720
GLPTDLARPL SVGQRVIAVH PKTREIHDGS VLIVDHSRYR IQFDNPELGV EFVMDIDCMP  780
LYLFENLPAS LLRQNAAISK FAENYNELKM NGQPKESKIE EKIKFTQYDN LENANSPSRT  840
SFSTFNVGSF SHPVKVDSSS PNLQLKVGPI EPVYAQQAAN SQPSALALVQ AREADVEALS  900
QLTRALDKKE ALVSELRRMN DEVLESQKGG DNYIKDSDSF KKQYAAVLFQ LNEVNEQVSS  960
ALFCLRQRNT YPGTSSVRLL KPLVKIGDHG CQLSSFDHSM HHVQESISHV ADIVESSRLK  1020
ARSMVDAAMQ AMSTLRKGGK SIERIEDAID FVNNQLSVDE FSVPAPRSST PIDSVHSTVT  1080
CLDHQTACVS HPLALSHIPD KKLQNLSDQD DLRIPSDLIA HCVATLLMIQ KCTERQFPPG  1140
DVAQVLDSAV TSLKPCCSQN LPIYTEIQKC MGIIRNQILA LVPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	204	KRRRSESRPRAVGKRTPRVPISFSHDKNK
2	482	487	MRKRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein