PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740964.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 265aa MW: 30638.9 Da PI: 6.2593

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740964.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.3	2.3e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ +Ed++l ++++++G g W++ +++ ++R++k+c++rw +yl XP_022740964.1 14 RGAWSLQEDKILTNYIELHGEGKWRSLPQKACLNRCGKSCRLRWMNYL 61 89********************************************97 PP
2	Myb_DNA-binding	53.3	6.2e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ ++eE++l+v+++++lG++ W++Ia +++ gRt++++k++w+++ XP_022740964.1 67 RGNISPEEEDLIVRLHRLLGNR-WSLIAGRLP-GRTDNEIKNYWNSV 111 7899****************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MGRKPCCFKE GVNRGAWSLQ EDKILTNYIE LHGEGKWRSL PQKACLNRCG KSCRLRWMNY 60 LRQGIKRGNI SPEEEDLIVR LHRLLGNRWS LIAGRLPGRT DNEIKNYWNS VLSKKVNGDV 120 SKRSNKQLYE CVSKESVENY RSGITTNVIA PKATRCTKML LSLDKGKHLM NDQCHPPAST 180 IVDDDELKLE SHNEVHEMPY VEDEPLIDNV LTMPNAFDYL DFSQTRINDI FEKSNMLETD 240 LAPMFEMEFE NLASLLGLED EWRDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	3e-59	MYB family protein