PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740965.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 543aa MW: 56267.2 Da PI: 8.6944

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740965.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.8	2e-05	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022740965.1 61 FVCEICNKGFQRDQNLQLHKRGH 83 89******************988 PP
2	zf-C2H2	11.1	0.0013	137	159	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_022740965.1 137 WKCDKCSKKYAVQSDWKAHSKIC 159 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MPVDLDNSST GSGEASVSSS GNQNPPPKTT AKKKRNLPGM PDPDAEVIAL SPTTLLATNR 60 FVCEICNKGF QRDQNLQLHK RGHNLPWKLR QRSSKEVKKR VYVCPEPSCV HHNPSRALGD 120 LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRRDSFVT 180 HRAFCDALAE ESARAQTQPQ PQNQNHPVAN PSSESDLKVQ AVDSSPLPAP APVSSLAPAP 240 APVQVSAPAP APTPAAPPRP QSTSVISTSV LPVQNCELPE NPASIVEEAL APAPAPAGRN 300 GSCSSSTSSG SNGSSSSSVF ASLFASSAAS VSLQPPQPPA FTDLIRAMGR PDHPADLAPS 360 TSNEPISLCL STNHGSSIFG TARQERRQYA PPPQPAMSAT ALLQKAAQMG AAATNASLLR 420 GFGIVSSSSS SAQQDNLQWG QIQVEPDNAS VAAGLGLGLP CDGSSGLKEL MMGTPVFGPK 480 QTTLDFLGLG MAAGGSPNRG LSALITSIGG GLDVAAAAAA AAAAAAASFG GGDFTSKDIG 540 RSS

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MPVDLDNSST GSGEASVSSS GNQNPPPKTT AKKKRNLPGM PDPDAEVIAL SPTTLLATNR  60
FVCEICNKGF QRDQNLQLHK RGHNLPWKLR QRSSKEVKKR VYVCPEPSCV HHNPSRALGD  120
LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHSKICG TREYKCDCGT LFSRRDSFVT  180
HRAFCDALAE ESARAQTQPQ PQNQNHPVAN PSSESDLKVQ AVDSSPLPAP APVSSLAPAP  240
APVQVSAPAP APTPAAPPRP QSTSVISTSV LPVQNCELPE NPASIVEEAL APAPAPAGRN  300
GSCSSSTSSG SNGSSSSSVF ASLFASSAAS VSLQPPQPPA FTDLIRAMGR PDHPADLAPS  360
TSNEPISLCL STNHGSSIFG TARQERRQYA PPPQPAMSAT ALLQKAAQMG AAATNASLLR  420
GFGIVSSSSS SAQQDNLQWG QIQVEPDNAS VAAGLGLGLP CDGSSGLKEL MMGTPVFGPK  480
QTTLDFLGLG MAAGGSPNRG LSALITSIGG GLDVAAAAAA AAAAAAASFG GGDFTSKDIG  540
RSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-110	C2H2 family protein