PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740967.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 1165aa MW: 130098 Da PI: 9.5026

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740967.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.9	3.5e-11	48	83	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e++++a +++G++ Wk++a ++ +R+ +++ XP_022740967.1 48 QWTKEELERFYEAYRKYGKD-WKKVATMVR-NRSVEMV 83 6***************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1165 aa Download sequence
MAPSRKPKIA NKKFSYVNEV ASSKDGDSNS AKKSGQRKRK LSDMLGPQWT KEELERFYEA 60 YRKYGKDWKK VATMVRNRSV EMVEALYTMN RAYLSLPEGT ASVVGLIAMM TDHYCVMGGS 120 DSEQESNEGM GASRKPQKRS RVKVRDQPSK SVDKPLPDLL QFHSSTSSYG CLPLLKRRRS 180 ESRPRAVGKR TPRVPISFSH DKNKGERYFS PIRQGVKPKV DAVVDDVAHE IALALTKASQ 240 RGGSPQVSRT PNRKAETPSP VLNNERTNAE TETTSAKIHG SEVDEDACEL SLGSTEADNA 300 DYARDKNYSR NIEGTGTVEV EQKGKRYYRR KPEVEESVNN HPEDTKEACS GTEEGQKLCD 360 FKGKFDAEVA DAKTSRASIK GPRKRSKKVL FGGVEDTSFD ALQTLADLSL MMPETAADTE 420 SSVQFKEEKN EVVEKSKLKG NHPVPGAKGT ASKTSKQGKL FGHDVHAIPE AKEETHPGNV 480 GMRKRRQKSL PYKASDEVKN LQSKGKRSNN VAHSKQGKSV RPPEHTSSST DHGRDLKNSA 540 PSTIQVSSVN QVNLPTKVRS KRKMNAQKPV IGKDIKSSDN IVKGKFSVPV MLFHDRALNL 600 KEKLCSFLSS YQARRWCAFE WFYSTIDYPW FAKREFVEYL DHVGLGHVPR LTRVEWGVIR 660 SSLGKPRRFS EQFLKEEREK LNQYRESVRT HYAELRAGIG EGLPTDLARP LSVGQRVIAV 720 HPKTREIHDG SVLIVDHSRY RIQFDNPELG VEFVMDIDCM PLYLFENLPA SLLRQNAAIS 780 KFAENYNELK MNGQPKESKI EEKIKFTQYD NLENANSPSR TSFSTFNVGS FSHPVKVDSS 840 SPNLQLKVGP IEPVYAQQAA NSQPSALALV QAREADVEAL SQLTRALDKK EALVSELRRM 900 NDEVLESQKG GDNYIKDSDS FKKQYAAVLF QLNEVNEQVS SALFCLRQRN TYPGTSSVRL 960 LKPLVKIGDH GCQLSSFDHS MHHVQESISH VADIVESSRL KARSMVDAAM QAMSTLRKGG 1020 KSIERIEDAI DFVNNQLSVD EFSVPAPRSS TPIDSVHSTV TCLDHQTACV SHPLALSHIP 1080 DKKLQNLSDQ DDLRIPSDLI AHCVATLLMI QKCTERQFPP GDVAQVLDSA VTSLKPCCSQ 1140 NLPIYTEIQK CMGIIRNQIL ALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1165 aa Download sequence

MAPSRKPKIA NKKFSYVNEV ASSKDGDSNS AKKSGQRKRK LSDMLGPQWT KEELERFYEA  60
YRKYGKDWKK VATMVRNRSV EMVEALYTMN RAYLSLPEGT ASVVGLIAMM TDHYCVMGGS  120
DSEQESNEGM GASRKPQKRS RVKVRDQPSK SVDKPLPDLL QFHSSTSSYG CLPLLKRRRS  180
ESRPRAVGKR TPRVPISFSH DKNKGERYFS PIRQGVKPKV DAVVDDVAHE IALALTKASQ  240
RGGSPQVSRT PNRKAETPSP VLNNERTNAE TETTSAKIHG SEVDEDACEL SLGSTEADNA  300
DYARDKNYSR NIEGTGTVEV EQKGKRYYRR KPEVEESVNN HPEDTKEACS GTEEGQKLCD  360
FKGKFDAEVA DAKTSRASIK GPRKRSKKVL FGGVEDTSFD ALQTLADLSL MMPETAADTE  420
SSVQFKEEKN EVVEKSKLKG NHPVPGAKGT ASKTSKQGKL FGHDVHAIPE AKEETHPGNV  480
GMRKRRQKSL PYKASDEVKN LQSKGKRSNN VAHSKQGKSV RPPEHTSSST DHGRDLKNSA  540
PSTIQVSSVN QVNLPTKVRS KRKMNAQKPV IGKDIKSSDN IVKGKFSVPV MLFHDRALNL  600
KEKLCSFLSS YQARRWCAFE WFYSTIDYPW FAKREFVEYL DHVGLGHVPR LTRVEWGVIR  660
SSLGKPRRFS EQFLKEEREK LNQYRESVRT HYAELRAGIG EGLPTDLARP LSVGQRVIAV  720
HPKTREIHDG SVLIVDHSRY RIQFDNPELG VEFVMDIDCM PLYLFENLPA SLLRQNAAIS  780
KFAENYNELK MNGQPKESKI EEKIKFTQYD NLENANSPSR TSFSTFNVGS FSHPVKVDSS  840
SPNLQLKVGP IEPVYAQQAA NSQPSALALV QAREADVEAL SQLTRALDKK EALVSELRRM  900
NDEVLESQKG GDNYIKDSDS FKKQYAAVLF QLNEVNEQVS SALFCLRQRN TYPGTSSVRL  960
LKPLVKIGDH GCQLSSFDHS MHHVQESISH VADIVESSRL KARSMVDAAM QAMSTLRKGG  1020
KSIERIEDAI DFVNNQLSVD EFSVPAPRSS TPIDSVHSTV TCLDHQTACV SHPLALSHIP  1080
DKKLQNLSDQ DDLRIPSDLI AHCVATLLMI QKCTERQFPP GDVAQVLDSA VTSLKPCCSQ  1140
NLPIYTEIQK CMGIIRNQIL ALVPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	204	KRRRSESRPRAVGKRTPRVPISFSHDKNK
2	482	487	MRKRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein