PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740973.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 1160aa MW: 129701 Da PI: 9.427

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740973.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.9	3.5e-11	48	83	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 WT+eE e++++a +++G++ Wk++a ++ +R+ +++ XP_022740973.1 48 QWTKEELERFYEAYRKYGKD-WKKVATMVR-NRSVEMV 83 6***************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1160 aa Download sequence
MAPSRKPKIA NKKFSYVNEV ASSKDGDSNS AKKSGQRKRK LSDMLGPQWT KEELERFYEA 60 YRKYGKDWKK VATMVRNRSV EMVEALYTMN RGGSDSEQES NEGMGASRKP QKRSRVKVRD 120 QPSKSVDKPL PDLLQFHSST SSYGCLPLLK RRRSESRPRA VGKRTPRVPI SFSHDKNKGE 180 RYFSPIRQGV KPKVDAVVDD VAHEIALALT KASQRGGSPQ VSRTPNRKAE TPSPVLNNER 240 TNAETETTSA KIHGSEVDED ACELSLGSTE ADNADYARDK NYSRNIEGTG TVEVEQKGKR 300 YYRRKPEVEE SVNNHPEDTK EACSGTEEGQ KLCDFKGKFD AEVADAKTSR ASIKGPRKRS 360 KKVLFGGVED TSFDALQTLA DLSLMMPETA ADTESSVQFK EEKNEVVEKS KLKGNHPVPG 420 AKGTASKTSK QGKLFGHDVH AIPEAKEETH PGNVGMRKRR QKSLPYKMQI LKDETDADSH 480 LGESPNFEAS DEVKNLQSKG KRSNNVAHSK QGKSVRPPEH TSSSTDHGRD LKNSAPSTIQ 540 VSSVNQVNLP TKVRSKRKMN AQKPVIGKDI KSSDNIVKGK FSVPVMLFHD RALNLKEKLC 600 SFLSSYQARR WCAFEWFYST IDYPWFAKRE FVEYLDHVGL GHVPRLTRVE WGVIRSSLGK 660 PRRFSEQFLK EEREKLNQYR ESVRTHYAEL RAGIGEGLPT DLARPLSVGQ RVIAVHPKTR 720 EIHDGSVLIV DHSRYRIQFD NPELGVEFVM DIDCMPLYLF ENLPASLLRQ NAAISKFAEN 780 YNELKMNGQP KESKIEEKIK FTQYDNLENA NSPSRTSFST FNVGSFSHPV KVDSSSPNLQ 840 LKVGPIEPVY AQQAANSQPS ALALVQAREA DVEALSQLTR ALDKKEALVS ELRRMNDEVL 900 ESQKGGDNYI KDSDSFKKQY AAVLFQLNEV NEQVSSALFC LRQRNTYPGT SSVRLLKPLV 960 KIGDHGCQLS SFDHSMHHVQ ESISHVADIV ESSRLKARSM VDAAMQAMST LRKGGKSIER 1020 IEDAIDFVNN QLSVDEFSVP APRSSTPIDS VHSTVTCLDH QTACVSHPLA LSHIPDKKLQ 1080 NLSDQDDLRI PSDLIAHCVA TLLMIQKCTE RQFPPGDVAQ VLDSAVTSLK PCCSQNLPIY 1140 TEIQKCMGII RNQILALVPT

Sequence ? help Back to Top

Protein Sequence Length: 1160 aa Download sequence

MAPSRKPKIA NKKFSYVNEV ASSKDGDSNS AKKSGQRKRK LSDMLGPQWT KEELERFYEA  60
YRKYGKDWKK VATMVRNRSV EMVEALYTMN RGGSDSEQES NEGMGASRKP QKRSRVKVRD  120
QPSKSVDKPL PDLLQFHSST SSYGCLPLLK RRRSESRPRA VGKRTPRVPI SFSHDKNKGE  180
RYFSPIRQGV KPKVDAVVDD VAHEIALALT KASQRGGSPQ VSRTPNRKAE TPSPVLNNER  240
TNAETETTSA KIHGSEVDED ACELSLGSTE ADNADYARDK NYSRNIEGTG TVEVEQKGKR  300
YYRRKPEVEE SVNNHPEDTK EACSGTEEGQ KLCDFKGKFD AEVADAKTSR ASIKGPRKRS  360
KKVLFGGVED TSFDALQTLA DLSLMMPETA ADTESSVQFK EEKNEVVEKS KLKGNHPVPG  420
AKGTASKTSK QGKLFGHDVH AIPEAKEETH PGNVGMRKRR QKSLPYKMQI LKDETDADSH  480
LGESPNFEAS DEVKNLQSKG KRSNNVAHSK QGKSVRPPEH TSSSTDHGRD LKNSAPSTIQ  540
VSSVNQVNLP TKVRSKRKMN AQKPVIGKDI KSSDNIVKGK FSVPVMLFHD RALNLKEKLC  600
SFLSSYQARR WCAFEWFYST IDYPWFAKRE FVEYLDHVGL GHVPRLTRVE WGVIRSSLGK  660
PRRFSEQFLK EEREKLNQYR ESVRTHYAEL RAGIGEGLPT DLARPLSVGQ RVIAVHPKTR  720
EIHDGSVLIV DHSRYRIQFD NPELGVEFVM DIDCMPLYLF ENLPASLLRQ NAAISKFAEN  780
YNELKMNGQP KESKIEEKIK FTQYDNLENA NSPSRTSFST FNVGSFSHPV KVDSSSPNLQ  840
LKVGPIEPVY AQQAANSQPS ALALVQAREA DVEALSQLTR ALDKKEALVS ELRRMNDEVL  900
ESQKGGDNYI KDSDSFKKQY AAVLFQLNEV NEQVSSALFC LRQRNTYPGT SSVRLLKPLV  960
KIGDHGCQLS SFDHSMHHVQ ESISHVADIV ESSRLKARSM VDAAMQAMST LRKGGKSIER  1020
IEDAIDFVNN QLSVDEFSVP APRSSTPIDS VHSTVTCLDH QTACVSHPLA LSHIPDKKLQ  1080
NLSDQDDLRI PSDLIAHCVA TLLMIQKCTE RQFPPGDVAQ VLDSAVTSLK PCCSQNLPIY  1140
TEIQKCMGII RNQILALVPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	150	178	KRRRSESRPRAVGKRTPRVPISFSHDKNK
2	456	461	MRKRRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein