PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022741003.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WOX

Protein Properties

Length: 254aa MW: 28872 Da PI: 5.5587

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022741003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.9	2.7e-21	98	158	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ F + + +ps+++++e++++l +++e++V++WFqNrRa+ k+ XP_022741003.1 98 RQRWTPTPLQLQILERIFDQgTGTPSKQKIKEITSELsqhgQISETNVYNWFQNRRARSKR 158 89***************99************************************97 PP
2	Wus_type_Homeobox	102.9	2.1e-33	97	160	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ar+RWtPtp Q++iLe+++++G+ tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq XP_022741003.1 97 ARQRWTPTPLQLQILERIFDQGTGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQ 160 789***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MIMEWENQEH HHHHQENQNQ RDGVNVNVNN GGVMYVKVMT DEQLETLRKQ IAVYASICEQ 60 LVEMHKNLTA QQDLAGGRLG NLYCDPLMTS AGHKITARQR WTPTPLQLQI LERIFDQGTG 120 TPSKQKIKEI TSELSQHGQI SETNVYNWFQ NRRARSKRKQ LVSSSNNAES EVETEVESPN 180 EKKTKPENLL SQQNPAPRAE DLCFQNTEIT SELHFLGVLS NPNSYNGDDH LSGKMGMPGS 240 YNIYDEAEDY SMAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	152	160	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	1e-102	WOX family protein