PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022741072.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 248aa MW: 27428.1 Da PI: 8.1371

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022741072.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.7	2e-13	60	106	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN f++Lr+l+P a K++Ka+ L +++ ++++L XP_022741072.1 60 KNHSEAERRRRARINAHFDTLRDLVPGA-----NKMDKASLLAEVIGHLREL 106 58***********************8.....6***********99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MELPQLHSQT RCQGKTRNGS FSSSSSSSLV LDSERGELVE ATMNLPRKGV SADRNVAALK 60 NHSEAERRRR ARINAHFDTL RDLVPGANKM DKASLLAEVI GHLRELKKNA EEACEGILIP 120 MDTDEVRVEK EDEMDGNPCL IRATLCCDYK PGLLSDLRQA LDARHLMIAK AEMATWEGRM 180 KNVFLVASCK EGDSKDAAVR ISTSTVDQTL RSVLDKFSAS EEFSLRATLS NKRRRVSLFN 240 SSLSSSSA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	236	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	5e-26	bHLH family protein