PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022741138.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 324aa    MW: 36423.3 Da    PI: 4.8802
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022741138.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.89.1e-1958111356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k+++++ +q+++Le+ Fe ++++  e++ +LA++lgL+ rqV vWFqNrRa++k
  XP_022741138.1  58 KKRRLSVDQVKALEKNFEVENKLEPERKLKLAQELGLQPRQVAVWFQNRRARWK 111
                     566899***********************************************9 PP
2HD-ZIP_I/II128.92.1e-4157149193
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     ekkrrls +qvk+LE++Fe e+kLeperK +la+eLglqprqvavWFqnrRAR+ktkqlE+dy  Lk++yd+lk + ++L++++e+L +e++e
  XP_022741138.1  57 EKKRRLSVDQVKALEKNFEVENKLEPERKLKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKTSYDTLKVNYDTLQHDNEALLKEIRE 149
                     69*************************************************************************************999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MKRSLGSSDS LGALMSICPN TDEHSPRNNH IYSREFQSML DGLDEEGCVE EAGHVAEKKR  60
RLSVDQVKAL EKNFEVENKL EPERKLKLAQ ELGLQPRQVA VWFQNRRARW KTKQLERDYG  120
LLKTSYDTLK VNYDTLQHDN EALLKEIREL KAKLKGESTG NNLSVKKEVI VPETDNKTLE  180
QSELPPVSSL ATLSEPAELN YESFNNSNGS VGATLFSDLK DGSSDSDSSA ILNEDNNNAA  240
ISSSGVLQGQ HLLMSPTTTS SLNFNSSASS PSSMNCFQFS KTTYQPHQFV KMEEHNFFSA  300
EEACNFFSDE QAPSLHWYCP EHWD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15887KKRRLSVDQVKALEKNFEVENKLEPERKLK
2106114RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22430.11e-78HD-ZIP family protein