PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022741158.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 377aa    MW: 41390.3 Da    PI: 6.7786
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022741158.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.32.5e-19293327135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+Cg+tkTp+WR gp g ktLCnaCG+++++ +l
  XP_022741158.1 293 CSHCGVTKTPQWRAGPMGAKTLCNACGVRFKSGRL 327
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MLYQTHHLPF FFKFRSFTAI PLSSSSTPAI LPSSLQEMEC VEAALKTSFR KEIALKSSPQ  60
AFLEDIGVAN GQNGVSCDDF SVDDLFDFTN EDGFLEQQRE VEEEEETRVS SSPKRQKLSQ  120
EDHFSNDTTN FNYGSLSTNE FPVPADDVEN LIWLSHFVED SFSEYSTAYP SGTLTEKPRL  180
PADELLPEPD KPVTTCFKTP VPAKARSKRT RTGGRVWSLV ASPSLTESSS SSTSSSSSSS  240
PSSPWLLCPN IVSGSAFELS EPLSVEKPPV KKHKKRLATD SAGGSGTQPT RRCSHCGVTK  300
TPQWRAGPMG AKTLCNACGV RFKSGRLLPE YRPACSPTFS SELHSNHHRK VQEMRRKKET  360
LGQAEPGLAP PVVPSFG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1270277VKKHKKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.21e-90GATA family protein