PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022741213.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 250aa    MW: 27957.8 Da    PI: 7.8506
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022741213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.62.3e-20132166135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  XP_022741213.1 132 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 166
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MMHRCSSSQG NMVGPCSCGL FHSQSNSFSM LFSMPNHKSF DETDMYPFTC SSSSSVDCTL  60
SLGTPSTRLC EDDDKRIHHD HRSGNSCMSN FCWDLLQNKN TPYSQQTPKV SRGSNGNSSN  120
SSGNDPLLAR RCANCDTTST PLWRNGPRGP KSLCNACGIR FKKEERRATA ANANNSSGAT  180
APMLEQHHGY HHNNSWVHHS QNQKMPCFPP VNEFRFIEDT DRDSDNGNPF LSWRLNVTDR  240
PASLVHDFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.17e-64GATA family protein