PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022741403.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 153aa MW: 17861.7 Da PI: 10.3949

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022741403.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	86.6	1.4e-27	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr+g++KKA+EL +LCdaev ++ifsstgklye++s XP_022741403.1 10 RIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSTGKLYEFAS 59 8***********************************************86 PP
2	K-box	63.1	1e-21	81	143	9	71
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKne 71 +++++ + +q+e+a L++++++Lq+++R+l+Ge+L Ls+++Lq+Le+qLe sl+ +R kK + XP_022741403.1 81 NSSSEVKFWQKEAAILRQQLQKLQENHRQLMGEQLYGLSVEDLQNLENQLEMSLRGVRMKKVR 143 788999******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 153 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRKGLIK KAKELAILCD AEVGLVIFSS TGKLYEFAST 60 SMKSVIERYN SLKEEHQQLL NSSSEVKFWQ KEAAILRQQL QKLQENHRQL MGEQLYGLSV 120 EDLQNLENQL EMSLRGVRMK KVRNLQYLYN FYA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	1e-82	MIKC_MADS family protein