PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022741494.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 229aa    MW: 26673.4 Da    PI: 10.052
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022741494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.31.8e-27959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien +nrqvt+sk rng++KKA+EL vLCda+v++i+fsstgk++e++s
  XP_022741494.1  9 KRIENATNRQVTYSKTRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFIS 59
                    79***********************************************86 PP
2K-box86.36.2e-2971166195
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLq.reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 
                     yqk++g++l+++++e++q+++++Lk+ +++L+ + +R+++G +L++L++keLq Le ++++sl  +R++K++++++q+ + +kk ++l+e+  +L
  XP_022741494.1  71 YQKTTGTDLWSSHYEKMQENYRRLKEINKKLRrEIIRQRMGGELDDLNIKELQALEAKMDSSLVFVRDRKYHVIKTQTYTHKKKVRNLEERRANL 165
                     8999****************************5568*******************************************************9999 PP

           K-box  95 r 95 
                      
  XP_022741494.1 166 V 166
                     6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MGRGKIEIKR IENATNRQVT YSKTRNGLFK KAQELTVLCD AKVSLIMFSS TGKFHEFISP  60
NISTKAFFDL YQKTTGTDLW SSHYEKMQEN YRRLKEINKK LRREIIRQRM GGELDDLNIK  120
ELQALEAKMD SSLVFVRDRK YHVIKTQTYT HKKKVRNLEE RRANLVFNLE TKLDHQDGIV  180
DNEGYYEAAA LGLANGASNL YALRLYQGYH PNLILHHGEK YGSNDLRHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.13e-64MIKC_MADS family protein