PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022741495.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 228aa MW: 26535.3 Da PI: 9.9767

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022741495.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	86.3	1.8e-27	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqvt+sk rng++KKA+EL vLCda+v++i+fsstgk++e++s XP_022741495.1 9 KRIENATNRQVTYSKTRNGLFKKAQELTVLCDAKVSLIMFSSTGKFHEFIS 59 79***********************************************86 PP
2	K-box	86.8	4.3e-29	71	165	1	95
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 yqk++g++l+++++e++q+++++Lk+ +++L+re+ +++G +L++L++keLq Le ++++sl +R++K++++++q+ + +kk ++l+e+ +L XP_022741495.1 71 YQKTTGTDLWSSHYEKMQENYRRLKEINKKLRREIMQRMGGELDDLNIKELQALEAKMDSSLVFVRDRKYHVIKTQTYTHKKKVRNLEERRANLV 165 8999**************************************************************************************99996 PP

Sequence ? help Back to Top
Protein Sequence Length: 228 aa Download sequence
MGRGKIEIKR IENATNRQVT YSKTRNGLFK KAQELTVLCD AKVSLIMFSS TGKFHEFISP 60 NISTKAFFDL YQKTTGTDLW SSHYEKMQEN YRRLKEINKK LRREIMQRMG GELDDLNIKE 120 LQALEAKMDS SLVFVRDRKY HVIKTQTYTH KKKVRNLEER RANLVFNLET KLDHQDGIVD 180 NEGYYEAAAL GLANGASNLY ALRLYQGYHP NLILHHGEKY GSNDLRHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54340.1	9e-66	MIKC_MADS family protein