PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022741656.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 539aa MW: 59514.4 Da PI: 8.3341

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022741656.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.2	2.2e-16	343	389	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq XP_022741656.1 343 VHNLSERRRRDRINEKMRALQELIPHC-----NKSDKASMLDEAIEYLKSLQ 389 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MNHCIPEWSF EYDLPVSNHR KRLGQDNELV ELLWQNGQVV LHSQTHRKNV PNPCESRQVE 60 KNDQPTSRGG TTSLSYGNSS NLIHDDETVS WIQYPIEDSF EKEFCSNFFS EFPSPVPMEA 120 DNNKPNRQLK QHQQQFVKSS AASPTIFNKT ANSQELNVSS AAQEFQGNPM PPPKFQFDST 180 QQNKNSEGLG KVLNFSPVTE HTGVKSSGGN LIQREVKDSS GMKVGSSYCG SNQIRNDVNL 240 SRGSSNWFGT TTTGLSAGTS KDDARKTIVQ IEKGKTETIE PTVTSSSGAT CKQSTGVISS 300 HKRKSRDGEN NECQSEAAEL QSAAGNKSAQ RSGSSRRSRA AEVHNLSERR RRDRINEKMR 360 ALQELIPHCN KSDKASMLDE AIEYLKSLQL QLQVMWMGSG MAPMMFPGIQ HYMSRMGMGM 420 GPPAFPSIHN PLHLSRAPVV DQSISMAFPS QNQAATCQTQ QLNQVNYPHH MQNPIFAEQY 480 ARFLGFHHMQ TASQPMNMFG YGSQTTPQSP MVLAPSSCSI PLTGGAATIN NTSLSGKMG

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MNHCIPEWSF EYDLPVSNHR KRLGQDNELV ELLWQNGQVV LHSQTHRKNV PNPCESRQVE  60
KNDQPTSRGG TTSLSYGNSS NLIHDDETVS WIQYPIEDSF EKEFCSNFFS EFPSPVPMEA  120
DNNKPNRQLK QHQQQFVKSS AASPTIFNKT ANSQELNVSS AAQEFQGNPM PPPKFQFDST  180
QQNKNSEGLG KVLNFSPVTE HTGVKSSGGN LIQREVKDSS GMKVGSSYCG SNQIRNDVNL  240
SRGSSNWFGT TTTGLSAGTS KDDARKTIVQ IEKGKTETIE PTVTSSSGAT CKQSTGVISS  300
HKRKSRDGEN NECQSEAAEL QSAAGNKSAQ RSGSSRRSRA AEVHNLSERR RRDRINEKMR  360
ALQELIPHCN KSDKASMLDE AIEYLKSLQL QLQVMWMGSG MAPMMFPGIQ HYMSRMGMGM  420
GPPAFPSIHN PLHLSRAPVV DQSISMAFPS QNQAATCQTQ QLNQVNYPHH MQNPIFAEQY  480
ARFLGFHHMQ TASQPMNMFG YGSQTTPQSP MVLAPSSCSI PLTGGAATIN NTSLSGKMG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	348	353	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43010.2	1e-40	bHLH family protein