PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022741657.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 529aa MW: 58338 Da PI: 8.0049

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022741657.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.3	2.1e-16	330	376	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq XP_022741657.1 330 VHNLSERRRRDRINEKMRALQELIPHC-----NKSDKASMLDEAIEYLKSLQ 376 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MNHCIPEWSF DQDNELVELL WQNGQVVLHS QTHRKNVPNP CESRQVEKND QPTSRGGTTS 60 LSYGNSSNLI HDDETVSWIQ YPIEDSFEKE FCSNFFSEFP SPVPMEADNN KPNRQLKQHQ 120 QQFVKSSAAS PTIFNKTANS QELNVSSAAQ EFQGNPMPPP KFQFDSTQQN KNSEGLGKVL 180 NFSPVTEHTG VKSSGGNLIQ REVKDSSGMK VGSSYCGSNQ IRNDVNLSRG SSNWFGTTTT 240 GLSAGTSKDD ARKTIVQIEK GKTETIEPTV TSSSGATCKQ STGVISSHKR KSRDGENNEC 300 QSEAAELQSA AGNKSAQRSG SSRRSRAAEV HNLSERRRRD RINEKMRALQ ELIPHCNKSD 360 KASMLDEAIE YLKSLQLQLQ VFQVMWMGSG MAPMMFPGIQ HYMSRMGMGM GPPAFPSIHN 420 PLHLSRAPVV DQSISMAFPS QNQAATCQTQ QLNQVNYPHH MQNPIFAEQY ARFLGFHHMQ 480 TASQPMNMFG YGSQTTPQSP MVLAPSSCSI PLTGGAATIN NTSLSGKMG

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MNHCIPEWSF DQDNELVELL WQNGQVVLHS QTHRKNVPNP CESRQVEKND QPTSRGGTTS  60
LSYGNSSNLI HDDETVSWIQ YPIEDSFEKE FCSNFFSEFP SPVPMEADNN KPNRQLKQHQ  120
QQFVKSSAAS PTIFNKTANS QELNVSSAAQ EFQGNPMPPP KFQFDSTQQN KNSEGLGKVL  180
NFSPVTEHTG VKSSGGNLIQ REVKDSSGMK VGSSYCGSNQ IRNDVNLSRG SSNWFGTTTT  240
GLSAGTSKDD ARKTIVQIEK GKTETIEPTV TSSSGATCKQ STGVISSHKR KSRDGENNEC  300
QSEAAELQSA AGNKSAQRSG SSRRSRAAEV HNLSERRRRD RINEKMRALQ ELIPHCNKSD  360
KASMLDEAIE YLKSLQLQLQ VFQVMWMGSG MAPMMFPGIQ HYMSRMGMGM GPPAFPSIHN  420
PLHLSRAPVV DQSISMAFPS QNQAATCQTQ QLNQVNYPHH MQNPIFAEQY ARFLGFHHMQ  480
TASQPMNMFG YGSQTTPQSP MVLAPSSCSI PLTGGAATIN NTSLSGKMG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	335	340	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43010.2	1e-38	bHLH family protein