PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022741723.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 935aa    MW: 103636 Da    PI: 6.5112
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022741723.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.18e-24135236199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_022741723.1 135 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 225
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_022741723.1 226 KNQLLLGIRRA 236
                     9999****997 PP
2Auxin_resp121.66e-40261344183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  XP_022741723.1 261 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 344
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 935 aa     Download sequence    
MRLSSSGFNQ QTQEVVKDLC VGEKKCLNSE LWHACAGPLV SLPPVGSRVV YFPQGHSEQV  60
AASTNKEVDA HIPNYPSLPP QLICQLHNVT MHADVETDEV YAQMTLQPLS PQEQKDVYLL  120
PAELGTPSKQ PTNYFCKTLT ASDTSTHGGF SVPRRAAEKV FPPLDFSQQP PAQELIARDL  180
HDNEWKFRHI FRGQPKRHLL TTGWSVFVSA KRLVAGDSVL FIWNEKNQLL LGIRRANRPQ  240
TVMPSSVLSS DSMHIGLLAA AAHAAATNSR FTIFYNPRAS PSEFVIPLAK YVKAVYHTRV  300
SVGMRFRMLF ETEESSVRRY MGTITGISDL DPVRWPNSHW RSVKVGWDES TAGERQPRVS  360
LWEIEPLTTF PMYPSSFPLR LKRPWPSAVP SFHAFKDGDM SINSQLMWLQ GGVGDQGIQS  420
LNFQGFGVAP WIQPRLDTSS IPGVQPDLYQ AMAAAALQEM RTVDSSKIGS QSLLQFQQPQ  480
STSNGSPCLI QRQMLQQSQT QNAFLQGFQE NQTASQVQLL QQLQRANSYN DQQQQQQQQQ  540
QQQQQQQQQQ QQQQQHQQQP QQQQSQQTQQ LPQFSVPQQI SNVIPAFPSA SANQVQSSSL  600
PAVASRCQQQ TFSDHLGNSI ATSDVSSMQS ILGSLSHAGA SHLLNLSGSN PIISSSALLS  660
KPVAIEPQLS SGPANRVLPQ VEQLGSAQSN VSELSNLLPP FPGREYAAYH GSTEPQNNLL  720
FGVSIDSSSL MLQHGMTNLK NIRNENDSLS LPYAASNFTS ASGTDFPLNS DMTTSSCVDE  780
SGYLQSSENV NHVNPPTRMY VKVHKSGSFG RSLDISTFSS YDELRFELAR MFGLEGQLED  840
PQRSGWQLVF VDRENDILLL GDDPWQEFVN NVWYIKVLSP LEVQQMGKEG LNPAASVPSQ  900
RLTAANSSNN CDVYMSRQEL RSSGNGVASL GSLEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein