PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022741724.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 932aa    MW: 103310 Da    PI: 6.437
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022741724.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.18e-24132233199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_022741724.1 132 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 222
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_022741724.1 223 KNQLLLGIRRA 233
                     9999****997 PP
2Auxin_resp121.65.9e-40258341183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  XP_022741724.1 258 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 341
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 932 aa     Download sequence    
MRLSSSGFNQ QTQEDLCVGE KKCLNSELWH ACAGPLVSLP PVGSRVVYFP QGHSEQVAAS  60
TNKEVDAHIP NYPSLPPQLI CQLHNVTMHA DVETDEVYAQ MTLQPLSPQE QKDVYLLPAE  120
LGTPSKQPTN YFCKTLTASD TSTHGGFSVP RRAAEKVFPP LDFSQQPPAQ ELIARDLHDN  180
EWKFRHIFRG QPKRHLLTTG WSVFVSAKRL VAGDSVLFIW NEKNQLLLGI RRANRPQTVM  240
PSSVLSSDSM HIGLLAAAAH AAATNSRFTI FYNPRASPSE FVIPLAKYVK AVYHTRVSVG  300
MRFRMLFETE ESSVRRYMGT ITGISDLDPV RWPNSHWRSV KVGWDESTAG ERQPRVSLWE  360
IEPLTTFPMY PSSFPLRLKR PWPSAVPSFH AFKDGDMSIN SQLMWLQGGV GDQGIQSLNF  420
QGFGVAPWIQ PRLDTSSIPG VQPDLYQAMA AAALQEMRTV DSSKIGSQSL LQFQQPQSTS  480
NGSPCLIQRQ MLQQSQTQNA FLQGFQENQT ASQVQLLQQL QRANSYNDQQ QQQQQQQQQQ  540
QQQQQQQQQQ QQHQQQPQQQ QSQQTQQLPQ FSVPQQISNV IPAFPSASAN QVQSSSLPAV  600
ASRCQQQTFS DHLGNSIATS DVSSMQSILG SLSHAGASHL LNLSGSNPII SSSALLSKPV  660
AIEPQLSSGP ANRVLPQVEQ LGSAQSNVSE LSNLLPPFPG REYAAYHGST EPQNNLLFGV  720
SIDSSSLMLQ HGMTNLKNIR NENDSLSLPY AASNFTSASG TDFPLNSDMT TSSCVDESGY  780
LQSSENVNHV NPPTRMYVKV HKSGSFGRSL DISTFSSYDE LRFELARMFG LEGQLEDPQR  840
SGWQLVFVDR ENDILLLGDD PWQEFVNNVW YIKVLSPLEV QQMGKEGLNP AASVPSQRLT  900
AANSSNNCDV YMSRQELRSS GNGVASLGSL EY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein