PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022741813.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WOX

Protein Properties

Length: 298aa MW: 33657.9 Da PI: 5.1727

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022741813.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.4	2.9e-19	31	91	3	57
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+t+t++q+++L++l+++ r psa++++++++ l +++ ++V++WFqN++a+e++ XP_022741813.1 31 SRWTPTTHQIRILKDLYYNngVRSPSADQIQRISAGLrqygKIEGKNVFYWFQNHKARERQ 91 8***************8678***********************************97 PP
2	Wus_type_Homeobox	112.2	2.7e-36	29	93	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RWtPt++Qi+iL++ly+ +G+r+P++++iqri+a L++yGkie+kNVfyWFQN+kaRerqk+ XP_022741813.1 29 SSSRWTPTTHQIRILKDLYYnNGVRSPSADQIQRISAGLRQYGKIEGKNVFYWFQNHKARERQKK 93 789*************9779***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MEPQLQQNQQ QPNEDSSGCG KGSFLCRQSS SRWTPTTHQI RILKDLYYNN GVRSPSADQI 60 QRISAGLRQY GKIEGKNVFY WFQNHKARER QKKRFTTTNH VPMQRPANGG WKADSIHNNK 120 YPNINPGYSP SSPSTGVLTV GQIGNYGYES ITMEKSFRFQ LYIYSFLTLN YCDQDCSISA 180 CGSSTGANES LSHNFGWVGI DPAYSSSYTF FDQKKFIDGI LEEEHEDDEE EEAAAPQIET 240 LPLFPMHGED INTFCSNIKP ETDSSYSSWY TSYDGYTGSR ASLELSLDSS AGRSQDFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	4e-52	WOX family protein