PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022741862.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 373aa MW: 41543.9 Da PI: 7.0355

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022741862.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.5	2.7e-17	73	118	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia++++ gRt+k+c++rw++ XP_022741862.1 73 RGHWKPAEDSKLKELVALYGPQNWNLIAERLQ-GRTGKSCRLRWFNQ 118 899***************************.*********996 PP
2	Myb_DNA-binding	52.2	1.4e-16	125	168	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++T+eE+e+l a++ +G++ W+ Iar + gRt++ +k++w+ XP_022741862.1 125 KKAFTEEEEERLMAAHRAYGNK-WAMIARLFH-GRTDNAVKNHWHV 168 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MKCPCSLDED GQNSELDDHF SKGVESIDGF GENNAAVSME DMRRRMICMS EDNNPGEGFL 60 NGKDVELSKV CARGHWKPAE DSKLKELVAL YGPQNWNLIA ERLQGRTGKS CRLRWFNQLD 120 PRINKKAFTE EEEERLMAAH RAYGNKWAMI ARLFHGRTDN AVKNHWHVIM ARKYREQASA 180 YRRRKLSQGV QRKLEENGNF DCREAANGNV TNPSSNPFLA SSVGSNGSNY NKTSGKEAAA 240 TSGRDLFPGS KSYYSFSAGE GICKNQRPLD FFSDDYRSQE GLISRNSRQW NVLQEETSLT 300 VSHPCSHPSQ MLLQQSSNHQ LFGFSDSIAS ASQFTVTEPS SPSPSAAENT VGSHFETSTP 360 SSPPFIDFLG VGA

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MKCPCSLDED GQNSELDDHF SKGVESIDGF GENNAAVSME DMRRRMICMS EDNNPGEGFL  60
NGKDVELSKV CARGHWKPAE DSKLKELVAL YGPQNWNLIA ERLQGRTGKS CRLRWFNQLD  120
PRINKKAFTE EEEERLMAAH RAYGNKWAMI ARLFHGRTDN AVKNHWHVIM ARKYREQASA  180
YRRRKLSQGV QRKLEENGNF DCREAANGNV TNPSSNPFLA SSVGSNGSNY NKTSGKEAAA  240
TSGRDLFPGS KSYYSFSAGE GICKNQRPLD FFSDDYRSQE GLISRNSRQW NVLQEETSLT  300
VSHPCSHPSQ MLLQQSSNHQ LFGFSDSIAS ASQFTVTEPS SPSPSAAENT VGSHFETSTP  360
SSPPFIDFLG VGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	8e-74	MYB family protein