PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022741898.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 473aa MW: 53193.7 Da PI: 5.1335

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022741898.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.9	2.8e-19	231	277	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd llv++v+++G++ W+ Ia++++ gR +kqc++rw+++l XP_022741898.1 231 KGQWTPEEDRLLVQLVTRHGTKKWSQIANMLN-GRVGKQCRERWHNHL 277 799***************************.***********97 PP
2	Myb_DNA-binding	55.3	1.5e-17	283	325	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++W++eEd+ll++++k+ G++ W+ Ia++++ gRt++ +k++w+ XP_022741898.1 283 KDSWSEEEDKLLIQLHKEIGNK-WAEIAKRLP-GRTENTIKNHWN 325 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MEFDTSFRED FSFLSSLFSD NIFDSTFKPD FGNGLFPPLP DGSSSSSASS SKGLLHNFIL 60 NPDHTEQSTP NVENASLLDN PDHFNQFSID GSSKNPFFGV SSTCTDPFEP YSGGFSTDLN 120 AYIPSLPFAP DDGVNNNSIF QGFESEGCWD FSQNKASAQP LPETDHSYHQ QPPNFQDDQQ 180 PPMTAKLADE GSCVTADQNG NYQDKVDQQE NKRFSDARKV SKPIVKTDII KGQWTPEEDR 240 LLVQLVTRHG TKKWSQIANM LNGRVGKQCR ERWHNHLRPD IKKDSWSEEE DKLLIQLHKE 300 IGNKWAEIAK RLPGRTENTI KNHWNATKRR QCSRRKGKYA HPKGSLLQTY IKSVSSTTST 360 RKDKGNRVLE ITNPEMKSNQ LETSDFNPTD WPVVACNDKA GDHHQPMSFS FDANVFPDCN 420 QSCTASLGSM HEEANPCGSV VEESNAMDYE VTLEMDSLKK QLDLLEMISQ GNL

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MEFDTSFRED FSFLSSLFSD NIFDSTFKPD FGNGLFPPLP DGSSSSSASS SKGLLHNFIL  60
NPDHTEQSTP NVENASLLDN PDHFNQFSID GSSKNPFFGV SSTCTDPFEP YSGGFSTDLN  120
AYIPSLPFAP DDGVNNNSIF QGFESEGCWD FSQNKASAQP LPETDHSYHQ QPPNFQDDQQ  180
PPMTAKLADE GSCVTADQNG NYQDKVDQQE NKRFSDARKV SKPIVKTDII KGQWTPEEDR  240
LLVQLVTRHG TKKWSQIANM LNGRVGKQCR ERWHNHLRPD IKKDSWSEEE DKLLIQLHKE  300
IGNKWAEIAK RLPGRTENTI KNHWNATKRR QCSRRKGKYA HPKGSLLQTY IKSVSSTTST  360
RKDKGNRVLE ITNPEMKSNQ LETSDFNPTD WPVVACNDKA GDHHQPMSFS FDANVFPDCN  420
QSCTASLGSM HEEANPCGSV VEESNAMDYE VTLEMDSLKK QLDLLEMISQ GNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27785.1	1e-70	MYB family protein