PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022741916.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 262aa MW: 29874.5 Da PI: 6.1705

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022741916.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.7	6.3e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l + + G ++W+t+++ g+ R++k+c++rw +yl XP_022741916.1 14 RGPWTIEEDHKLMNFILNNGIHCWRTVPKLAGLLRCGKSCRLRWINYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	51.3	2.7e-16	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T+ E++++++++ lG++ W++Ia++++ gRt++++k++w++ XP_022741916.1 67 RGGFTESEEDQIIQLHSCLGNR-WSKIASHFP-GRTDNEIKNHWNT 110 788*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MGRQPCCDKV GLKRGPWTIE EDHKLMNFIL NNGIHCWRTV PKLAGLLRCG KSCRLRWINY 60 LRPDLKRGGF TESEEDQIIQ LHSCLGNRWS KIASHFPGRT DNEIKNHWNT RIKKKLKLLG 120 LDPVTHKPID KAEKTDGKNK MTSDSSNSSN KQEASLESKS EDDHGMTVSP RKDEKLEEIQ 180 VTLDDTNDLL NNYQMLCGSF DLDSWLNQET NTSSSYTSSF SVEESNNPSM GETTSIQEES 240 LKQWIDSVDS FLSWDSSFLL GI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14340.1	8e-87	MYB family protein