PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022742208.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

NF-X1

Protein Properties

Length: 869aa MW: 97642.6 Da PI: 8.3977

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022742208.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	16.1	2.5e-05	183	201	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG H C lCH+GpCp+Cp+ XP_022742208.1 183 CG-HFCLLLCHPGPCPSCPK 201 .*************96 PP
2	zf-NF-X1	17.8	7.1e-06	395	414	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG+H C++ C+ G+CppC++ XP_022742208.1 395 CGRHACKRRCCDGNCPPCSE 414 ******************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 869 aa Download sequence
MTTMVNYDTP SPFSDSDSDS DSENFHVGSD LSNSIFKTYL EFSSSSSITA VDLSKIQSFL 60 TSSSSGALSC LICLERIRPS DPTWSCSSLC FALFHLLCIQ SWARQSSDLS AARAAARLPI 120 TAETAAKQAT WNCPKCRSSY SKSQIPRSYL CFCGKLQDPP SDNPWILPHS CGEICNRPLP 180 NNCGHFCLLL CHPGPCPSCP KSIKTRCFCG SFEDFRRCGF KNFSCNRHCN KRLDCNKHNC 240 LEICHLGTCP PCRARDVYRC RCGKKEEEKE CCDRDFRCEN ECKKLLNCEK HVCERGCHAG 300 DCGECPLQGK RTCPCGKRVY EGMPCDGTAP VCGATCNKLL NCGFHRCPER CHKGPCVETC 360 RIVVKKSCRC GGLKKEVPCY QDLSCERKCL RMRDCGRHAC KRRCCDGNCP PCSEVCDKRL 420 RCKNHKCPAP CHRGACAPCP VMVTISCACG ETHFEVPCGT EINQKPPKCR KLCKITPLCR 480 HASNCKPHRC HYGACPQCWL LCEEEYPCGH KCNLRCHGPR PPPNPEFTLK PKKKKSNHHT 540 AYTPGIPCPP CPEIVWRPCV GQHIGAERMM VCSDRARFSC DNLCGNLLPC GNHYCTKTCH 600 PLEIQSSLSE HRKGSESCEE CNLPCQKERM PICPHPCPLP CHPAECPPCK VLLKRSCHCS 660 AMVHAFECIY YNNLSEKDQV AVRSCGGPCH RKLPNCTHLC PEICHAGRCP APDKCCKRVT 720 VRCKCQTLKK EWICQDVQAA YCDIGYDPKD ISKNQFGLGL LPCNSDCKSK VQEVDSALQL 780 RKPKVLEKKE PENEKHVSKR RKRRDRIQEG KQVSKPQKLV GTLKRLLLFI IIVAALIAVT 840 YYGYKGLLRL SDWMNEVEVQ RAKRRHQRI

Sequence ? help Back to Top

Protein Sequence Length: 869 aa Download sequence

MTTMVNYDTP SPFSDSDSDS DSENFHVGSD LSNSIFKTYL EFSSSSSITA VDLSKIQSFL  60
TSSSSGALSC LICLERIRPS DPTWSCSSLC FALFHLLCIQ SWARQSSDLS AARAAARLPI  120
TAETAAKQAT WNCPKCRSSY SKSQIPRSYL CFCGKLQDPP SDNPWILPHS CGEICNRPLP  180
NNCGHFCLLL CHPGPCPSCP KSIKTRCFCG SFEDFRRCGF KNFSCNRHCN KRLDCNKHNC  240
LEICHLGTCP PCRARDVYRC RCGKKEEEKE CCDRDFRCEN ECKKLLNCEK HVCERGCHAG  300
DCGECPLQGK RTCPCGKRVY EGMPCDGTAP VCGATCNKLL NCGFHRCPER CHKGPCVETC  360
RIVVKKSCRC GGLKKEVPCY QDLSCERKCL RMRDCGRHAC KRRCCDGNCP PCSEVCDKRL  420
RCKNHKCPAP CHRGACAPCP VMVTISCACG ETHFEVPCGT EINQKPPKCR KLCKITPLCR  480
HASNCKPHRC HYGACPQCWL LCEEEYPCGH KCNLRCHGPR PPPNPEFTLK PKKKKSNHHT  540
AYTPGIPCPP CPEIVWRPCV GQHIGAERMM VCSDRARFSC DNLCGNLLPC GNHYCTKTCH  600
PLEIQSSLSE HRKGSESCEE CNLPCQKERM PICPHPCPLP CHPAECPPCK VLLKRSCHCS  660
AMVHAFECIY YNNLSEKDQV AVRSCGGPCH RKLPNCTHLC PEICHAGRCP APDKCCKRVT  720
VRCKCQTLKK EWICQDVQAA YCDIGYDPKD ISKNQFGLGL LPCNSDCKSK VQEVDSALQL  780
RKPKVLEKKE PENEKHVSKR RKRRDRIQEG KQVSKPQKLV GTLKRLLLFI IIVAALIAVT  840
YYGYKGLLRL SDWMNEVEVQ RAKRRHQRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05660.1	0.0	NF-X1 family protein