PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022742209.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

NF-X1

Protein Properties

Length: 790aa MW: 88812.2 Da PI: 8.4239

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022742209.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	16.2	2.2e-05	183	201	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG H C lCH+GpCp+Cp+ XP_022742209.1 183 CG-HFCLLLCHPGPCPSCPK 201 .*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence
MTTMVNYDTP SPFSDSDSDS DSENFHVGSD LSNSIFKTYL EFSSSSSITA VDLSKIQSFL 60 TSSSSGALSC LICLERIRPS DPTWSCSSLC FALFHLLCIQ SWARQSSDLS AARAAARLPI 120 TAETAAKQAT WNCPKCRSSY SKSQIPRSYL CFCGKLQDPP SDNPWILPHS CGEICNRPLP 180 NNCGHFCLLL CHPGPCPSCP KSIKTRCFCG SFEDFRRCGF KNFSCNRHCN KRLDCNKHNC 240 LEICHLGTCP PCRARDVYRC RCGKKEEEKE CCDRDFRCEN ECKKLLNCEK HVCERGCHAG 300 DCGECPLQGK RTCPCGKRVY EGMPCDGTAP VCGATCNKLL NCGFHRCPER CHKGPCVETC 360 RIVVKKSCRC GGLKKEVPCG TEINQKPPKC RKLCKITPLC RHASNCKPHR CHYGACPQCW 420 LLCEEEYPCG HKCNLRCHGP RPPPNPEFTL KPKKKKSNHH TAYTPGIPCP PCPEIVWRPC 480 VGQHIGAERM MVCSDRARFS CDNLCGNLLP CGNHYCTKTC HPLEIQSSLS EHRKGSESCE 540 ECNLPCQKER MPICPHPCPL PCHPAECPPC KVLLKRSCHC SAMVHAFECI YYNNLSEKDQ 600 VAVRSCGGPC HRKLPNCTHL CPEICHAGRC PAPDKCCKRV TVRCKCQTLK KEWICQDVQA 660 AYCDIGYDPK DISKNQFGLG LLPCNSDCKS KVQEVDSALQ LRKPKVLEKK EPENEKHVSK 720 RRKRRDRIQE GKQVSKPQKL VGTLKRLLLF IIIVAALIAV TYYGYKGLLR LSDWMNEVEV 780 QRAKRRHQRI

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence

MTTMVNYDTP SPFSDSDSDS DSENFHVGSD LSNSIFKTYL EFSSSSSITA VDLSKIQSFL  60
TSSSSGALSC LICLERIRPS DPTWSCSSLC FALFHLLCIQ SWARQSSDLS AARAAARLPI  120
TAETAAKQAT WNCPKCRSSY SKSQIPRSYL CFCGKLQDPP SDNPWILPHS CGEICNRPLP  180
NNCGHFCLLL CHPGPCPSCP KSIKTRCFCG SFEDFRRCGF KNFSCNRHCN KRLDCNKHNC  240
LEICHLGTCP PCRARDVYRC RCGKKEEEKE CCDRDFRCEN ECKKLLNCEK HVCERGCHAG  300
DCGECPLQGK RTCPCGKRVY EGMPCDGTAP VCGATCNKLL NCGFHRCPER CHKGPCVETC  360
RIVVKKSCRC GGLKKEVPCG TEINQKPPKC RKLCKITPLC RHASNCKPHR CHYGACPQCW  420
LLCEEEYPCG HKCNLRCHGP RPPPNPEFTL KPKKKKSNHH TAYTPGIPCP PCPEIVWRPC  480
VGQHIGAERM MVCSDRARFS CDNLCGNLLP CGNHYCTKTC HPLEIQSSLS EHRKGSESCE  540
ECNLPCQKER MPICPHPCPL PCHPAECPPC KVLLKRSCHC SAMVHAFECI YYNNLSEKDQ  600
VAVRSCGGPC HRKLPNCTHL CPEICHAGRC PAPDKCCKRV TVRCKCQTLK KEWICQDVQA  660
AYCDIGYDPK DISKNQFGLG LLPCNSDCKS KVQEVDSALQ LRKPKVLEKK EPENEKHVSK  720
RRKRRDRIQE GKQVSKPQKL VGTLKRLLLF IIIVAALIAV TYYGYKGLLR LSDWMNEVEV  780
QRAKRRHQRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05660.1	0.0	NF-X1 family protein