PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022742252.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 237aa MW: 27645.8 Da PI: 5.9774

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022742252.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.9	4.9e-18	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEde+l+ vk+lG+++W+ +ar g++R++k+c++rw++yl XP_022742252.1 16 KGPWHEEEDERLITFVKLLGSRRWDYVARVSGLKRSGKSCRLRWLNYL 63 79********************************************97 PP
2	Myb_DNA-binding	51.8	1.9e-16	73	114	5	48
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +++E++++++++k++G++ W+ Iar+++ gRt++++k++w++yl XP_022742252.1 73 SADEEKIILQLHKRWGNK-WSMIARRLP-GRTDNEIKNYWRTYL 114 89**************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MVHEKAEPMQ EESLHKGPWH EEEDERLITF VKLLGSRRWD YVARVSGLKR SGKSCRLRWL 60 NYLRPNLKHG HISADEEKII LQLHKRWGNK WSMIARRLPG RTDNEIKNYW RTYLRKKALI 120 QEQENFQLGR DNGKQLSLFQ EDGSSAQTYN GESYKPCEDI LEAGNVSYDA VALSDYTLTS 180 SPYQTRLSDW ISEFPSDQSE IKSQEDSNST DSCNCYPAWI SQENDLWGCS GSLWNMD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53200.1	1e-66	MYB family protein