PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022742649.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 381aa MW: 40954.2 Da PI: 9.3074

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022742649.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	138.1	2.6e-43	83	158	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC++dlseak y++rhkvC +hsk+p+v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ XP_022742649.1 83 RCQVEGCKVDLSEAKAYYSRHKVCGMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKP 158 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MEMGSGSLTE SGGSSTNSST ESLNGLKFGK KIYFEDATVA AGTAGGGATM GTPPKSGPGS 60 SSSSGSRRKA RVGGVVQGAQ PPRCQVEGCK VDLSEAKAYY SRHKVCGMHS KSPKVIVAGL 120 EQRFCQQCSR FHQLPEFDQG KRSCRRRLAG HNERRRKPPT GSLLSSRFSR LSSSIFESSS 180 RGGSFIMDFT TYPRLSRRDA WITARSSECV SGNQNTGRSL PHPWQNNSDN PLPNLFLQGS 240 PGGTGFSSTG NHPEECFTGV GDSTCALSLL SNQPWGSRNR ASILGINDMI NTEGSSVVQP 300 STPHGAVVNP YSNASWGFKG NDSGYSSNEM HPHLGFAQIS EPLNGQFSGG LELSQQSRRQ 360 YMELEQSRAD DTSTQHIHWS L

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MEMGSGSLTE SGGSSTNSST ESLNGLKFGK KIYFEDATVA AGTAGGGATM GTPPKSGPGS  60
SSSSGSRRKA RVGGVVQGAQ PPRCQVEGCK VDLSEAKAYY SRHKVCGMHS KSPKVIVAGL  120
EQRFCQQCSR FHQLPEFDQG KRSCRRRLAG HNERRRKPPT GSLLSSRFSR LSSSIFESSS  180
RGGSFIMDFT TYPRLSRRDA WITARSSECV SGNQNTGRSL PHPWQNNSDN PLPNLFLQGS  240
PGGTGFSSTG NHPEECFTGV GDSTCALSLL SNQPWGSRNR ASILGINDMI NTEGSSVVQP  300
STPHGAVVNP YSNASWGFKG NDSGYSSNEM HPHLGFAQIS EPLNGQFSGG LELSQQSRRQ  360
YMELEQSRAD DTSTQHIHWS L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	4e-60	SBP family protein