PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022742792.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 310aa    MW: 34672.5 Da    PI: 8.5936
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022742792.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.65e-172269148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEde l++++k+ G g+W+t ++  g+ R++k+c++rw +yl
   XP_022742792.1 22 RGPWTPEEDEVLANYIKREGEGRWRTLPKQAGLLRCGKSCRLRWMNYL 69
                     89******************************99************97 PP
2Myb_DNA-binding48.42.2e-1575120148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rgr  ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
   XP_022742792.1  75 RGRIAPDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 120
                      678889****************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MRNPSSSTTS KTPCCSKVGI KRGPWTPEED EVLANYIKRE GEGRWRTLPK QAGLLRCGKS  60
CRLRWMNYLR PSVKRGRIAP DEEDLILRLH RLLGNRWSLI AGRIPGRTDN EIKNYWNTHL  120
SKKLISQGID PRTHKPLNLI SHGSSQVNHD PVPKSNPNPP NSSSSELGEK TITVTATKNA  180
TQDLTPTNLE YHQQYQNQQA GGNCLANWRN SEGATLIMGQ PSSGGNEGGY IENCNEDMFS  240
SFLDSLINDN FLVNQHQQQQ QPNNVLAAAA ASADQNFSHG NIWEAEIISS MVAFGNEQNS  300
SNNHHRHDQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.13e-74MYB family protein