PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022742877.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 245aa MW: 27400.4 Da PI: 4.94

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022742877.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.4	1.7e-18	9	54	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ed l+++v+q+G+++W+ I++ ++ gR++k+c++rw + XP_022742877.1 9 KGSWSPQEDANLIKLVEQHGPRNWSMISSGIP-GRSGKSCRLRWCNQ 54 799***************************.*********985 PP
2	Myb_DNA-binding	49.6	9.2e-16	63	105	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed ++++ ++ +G++ W+tIar ++ gRt++ +k++w++ XP_022742877.1 63 PFTPAEDAIIIQEHAVHGNK-WATIARLLP-GRTDNAIKNHWNST 105 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MINGGDRVKG SWSPQEDANL IKLVEQHGPR NWSMISSGIP GRSGKSCRLR WCNQLSPAVQ 60 HRPFTPAEDA IIIQEHAVHG NKWATIARLL PGRTDNAIKN HWNSTLRRKR ETELSSGSSE 120 SNSAVKRPSQ DASESDSENK RLCLGMVLHE HENAGLVGPK TLLTLSPPGE SFVSGQVEEK 180 VEDEEEEEEE EEEVVVKSEE EGGGGDEEEK SRAVMEETCL LTIMQRMIKE EVRSYIDRLR 240 AHQNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	3e-53	MYB family protein