PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022742880.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 478aa MW: 52550 Da PI: 7.1611

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022742880.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59.2	1.1e-18	102	188	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L++a+ e+ ++l+rg+l++ +Weev++++ r ++ ++s +qCk+k +nl+kryk +k++++++ ++s++p+f+++e XP_022742880.1 102 EWSDAAIGCLLQAYMERLTQLNRGNLRGRDWEEVAAAVseRCEKQSKSVEQCKNKVDNLKKRYKLEKHRMSDG-GITVSHWPWFKKME 188 5***********************************777778899*********************9.55667******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MASSVDDDFS LLDHHQTNPN HHHVLHHHPS YTQIHAPPPG NHEGDDDSDS AFPGANFGNN 60 NNNNATSSDV RIEKRKDQEE INDGVLKRPK QSTTENRKDR EEWSDAAIGC LLQAYMERLT 120 QLNRGNLRGR DWEEVAAAVS ERCEKQSKSV EQCKNKVDNL KKRYKLEKHR MSDGGITVSH 180 WPWFKKMEEI VGNSLPVKAV ADDDKDGSSP GTAVRQSKRY ASATPSPVGQ IISMKSKSPK 240 WRRVVFKISG AALACTGPHN IDPKVAVLIA REVSIACHHG VEVAIVVGGR NFFCGDTWVT 300 ATGLDRTTAY QIGMMASVMN SILLQSSLEK MGIQTRVQTA FSVQEVAEPY NRQRAIRHLE 360 KGRVVIFGGI GTGNPLFSTD TAAAIRASEI HAEAVLKGTN VDGVYDCHSQ DNNATFEHIS 420 FRELVSRGAT AMDMMALTFC EENGIPVVVF NLLQPGNISK ALCGDQVGTL IDQTGRIS

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MASSVDDDFS LLDHHQTNPN HHHVLHHHPS YTQIHAPPPG NHEGDDDSDS AFPGANFGNN  60
NNNNATSSDV RIEKRKDQEE INDGVLKRPK QSTTENRKDR EEWSDAAIGC LLQAYMERLT  120
QLNRGNLRGR DWEEVAAAVS ERCEKQSKSV EQCKNKVDNL KKRYKLEKHR MSDGGITVSH  180
WPWFKKMEEI VGNSLPVKAV ADDDKDGSSP GTAVRQSKRY ASATPSPVGQ IISMKSKSPK  240
WRRVVFKISG AALACTGPHN IDPKVAVLIA REVSIACHHG VEVAIVVGGR NFFCGDTWVT  300
ATGLDRTTAY QIGMMASVMN SILLQSSLEK MGIQTRVQTA FSVQEVAEPY NRQRAIRHLE  360
KGRVVIFGGI GTGNPLFSTD TAAAIRASEI HAEAVLKGTN VDGVYDCHSQ DNNATFEHIS  420
FRELVSRGAT AMDMMALTFC EENGIPVVVF NLLQPGNISK ALCGDQVGTL IDQTGRIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein