PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022742891.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CO-like

Protein Properties

Length: 428aa MW: 47014 Da PI: 5.8321

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022742891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17	1.2e-05	10	42	3	35
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHk 35 e+ C+ + ++ +C++++ lC +C H+ XP_022742891.1 10 EPLCDFCRGVRAVVYCKSDSARLCLSCDGCVHS 42 789****99**************999885 PP
2	CCT	61.7	2.3e-21	380	422	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 R++a++RY+eK+ktR F K+irY+sRKa+A++R+RvKGrFvk+ XP_022742891.1 380 RDKAKMRYNEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKA 422 899**************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MIRFENGSME PLCDFCRGVR AVVYCKSDSA RLCLSCDGCV HSANLLSRRH ARSLLCEKCN 60 SQSAIVRCLD EKLSLCQNCD WNGNGCSCLG HRREVLNCYT GCPSLAEFRR IWSSVLDASS 120 PGGFHDGLPF GALPDNDNCF ANCLNEREQG GSLGLDGTKL NELDPCPKRN PWMEPSSLIS 180 TNANYIPYCR DQEPLFSEES NMPKGYSDLK DFKVPDGDDL CLGLNMNDVQ LTFETADEIF 240 GCSQGQTRYQ FENVGTDCIP MEKTLSVTES DGPIENTFEA SSSGQKDCMA FPSSQVGGST 300 SMMAAMTGTP NCMLMNPGCS RNINLGYPVG QIRSTIALSL SNITGENSAT DYQECGLSPV 360 FLTGESPWES NLEGSCPQAR DKAKMRYNEK KKTRTFGKQI RYASRKARAD TRKRVKGRFV 420 KAGLVSLS

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MIRFENGSME PLCDFCRGVR AVVYCKSDSA RLCLSCDGCV HSANLLSRRH ARSLLCEKCN  60
SQSAIVRCLD EKLSLCQNCD WNGNGCSCLG HRREVLNCYT GCPSLAEFRR IWSSVLDASS  120
PGGFHDGLPF GALPDNDNCF ANCLNEREQG GSLGLDGTKL NELDPCPKRN PWMEPSSLIS  180
TNANYIPYCR DQEPLFSEES NMPKGYSDLK DFKVPDGDDL CLGLNMNDVQ LTFETADEIF  240
GCSQGQTRYQ FENVGTDCIP MEKTLSVTES DGPIENTFEA SSSGQKDCMA FPSSQVGGST  300
SMMAAMTGTP NCMLMNPGCS RNINLGYPVG QIRSTIALSL SNITGENSAT DYQECGLSPV  360
FLTGESPWES NLEGSCPQAR DKAKMRYNEK KKTRTFGKQI RYASRKARAD TRKRVKGRFV  420
KAGLVSLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21880.1	1e-102	CO-like family protein