PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022742969.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 381aa MW: 41966.8 Da PI: 7.3292

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022742969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.2	1.7e-17	118	163	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+q+G+ +W++Ia+++ gR++k+c++rw++ XP_022742969.1 118 RGHWREAEDAKLKELVAQHGPQNWNLIAEHLE-GRSGKSCRLRWFNQ 163 899***************************.*********996 PP
2	Myb_DNA-binding	57.7	2.7e-18	170	213	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++T+eE+e+l+ a++++G++ W+ Iar ++ gRt++ +k++w+ XP_022742969.1 170 KKAFTEEEEERLLAAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 213 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MSLQNLKNDF NCYSGVVQEM KFLAPPAIFP HSTERDTTLS HMGFQISSSL MEQSNKCLTF 60 EPLESRVTTR AVASDGKDGF LDVEKKVLSL NFGGEEERNK NSCCTGGSKN GHTKLCARGH 120 WREAEDAKLK ELVAQHGPQN WNLIAEHLEG RSGKSCRLRW FNQLDPRINK KAFTEEEEER 180 LLAAHRLYGN KWAMIARLFP GRTDNAVKNH WHVIMARKHR EESSIYRRRK PSSSATQAGL 240 DVTVQNNACS DQSTISSNID ESASTCTDLS LTPLSAKVPP GFFSSFSPVH QMGSVGEKVV 300 TRGNGDFDKF FGTGNVFYQQ GPMGVVTGVD ESAQSSDSNS EVSATESVAT NRTNHSMSGE 360 SANGNQKINM PFIDFLGVGA S

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MSLQNLKNDF NCYSGVVQEM KFLAPPAIFP HSTERDTTLS HMGFQISSSL MEQSNKCLTF  60
EPLESRVTTR AVASDGKDGF LDVEKKVLSL NFGGEEERNK NSCCTGGSKN GHTKLCARGH  120
WREAEDAKLK ELVAQHGPQN WNLIAEHLEG RSGKSCRLRW FNQLDPRINK KAFTEEEEER  180
LLAAHRLYGN KWAMIARLFP GRTDNAVKNH WHVIMARKHR EESSIYRRRK PSSSATQAGL  240
DVTVQNNACS DQSTISSNID ESASTCTDLS LTPLSAKVPP GFFSSFSPVH QMGSVGEKVV  300
TRGNGDFDKF FGTGNVFYQQ GPMGVVTGVD ESAQSSDSNS EVSATESVAT NRTNHSMSGE  360
SANGNQKINM PFIDFLGVGA S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17800.1	4e-70	MYB family protein