PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022742983.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 296aa MW: 33284 Da PI: 8.9763

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022742983.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.3	3e-17	19	66	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEdell+ ++k+ G g+W+t +++ g+ R++k+c++rw +yl XP_022742983.1 19 KGPWTPEEDELLATCIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 66 79****************************99**********97 PP
2	Myb_DNA-binding	47.1	5.3e-15	77	117	6	48
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l XP_022742983.1 77 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 117 89*************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MRNPATATAT RNNNGRQKKG PWTPEEDELL ATCIKKEGEG RWRTLPKRAG LLRCGKSCRL 60 RWMNYLRPSV KRGQIAPDEE DLILRLHRLL GNRWSLIAGR IPGRTDNEIK NYWNTHLSKK 120 LIRQGIDPRT HKPLNPQHST AHLKASSNSS KANLGASAAT LPNPNINPAS SSAQIMAADK 180 ENEHFQNHYQ TYDTAIAHGF TSDLLNCDAS RIEMRSSSNQ NQGSNEDCTD DAFSSFLNSL 240 INEDAFTNQN QMQQQTNGIE QVDGTTFSLG QGWESPIMSS NYFNQNDPKR INDHLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	7e-78	MYB family protein