PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743069.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 399aa MW: 43735.2 Da PI: 6.7741

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743069.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.5e-17	55	100	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g W++eEd +l ++v ++G+++W++Iar + gR++k+c++rw + XP_022743069.1 55 KGTWSPEEDAILSELVSKFGPRNWSLIARGIA-GRSGKSCRLRWCNQ 100 799***************************.*********985 PP
2	Myb_DNA-binding	53.4	5.8e-17	107	151	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd ++ a++ +G++ W+ Iar ++ gRt++ +k++w++ XP_022743069.1 107 RKPFTDEEDRMIISAHAVHGNK-WAVIARLLP-GRTDNAIKNHWNST 151 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
METEIEAVEN GSDKTVTEIN VPSAPYGGEA AEQAGCRGGG DDSAVRGRTR KERVKGTWSP 60 EEDAILSELV SKFGPRNWSL IARGIAGRSG KSCRLRWCNQ LDPAVKRKPF TDEEDRMIIS 120 AHAVHGNKWA VIARLLPGRT DNAIKNHWNS TLRRRCMELG RIKSESENIV EDVSLDKTKA 180 SSEETMSCAE GSSYRSLEGK NVSSLERLDN QLKRKAPIGI QSSHESIKPA TLFRPIARIS 240 AFNVYNNVGA QEFVSPCSRP VPMLGPPIQT SKPDVEICKL LEGVYAECLV PLQCGHGCCG 300 PQNGRNPNST LLGPEFVEFS EPPSFPNYEL AAIATDINNL AWLKSGLENN SIRAMDDAAN 360 NTAPHGSQVH MGHFEEGRMS GHLRIEERNN NLMGNLLST

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

METEIEAVEN GSDKTVTEIN VPSAPYGGEA AEQAGCRGGG DDSAVRGRTR KERVKGTWSP  60
EEDAILSELV SKFGPRNWSL IARGIAGRSG KSCRLRWCNQ LDPAVKRKPF TDEEDRMIIS  120
AHAVHGNKWA VIARLLPGRT DNAIKNHWNS TLRRRCMELG RIKSESENIV EDVSLDKTKA  180
SSEETMSCAE GSSYRSLEGK NVSSLERLDN QLKRKAPIGI QSSHESIKPA TLFRPIARIS  240
AFNVYNNVGA QEFVSPCSRP VPMLGPPIQT SKPDVEICKL LEGVYAECLV PLQCGHGCCG  300
PQNGRNPNST LLGPEFVEFS EPPSFPNYEL AAIATDINNL AWLKSGLENN SIRAMDDAAN  360
NTAPHGSQVH MGHFEEGRMS GHLRIEERNN NLMGNLLST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	1e-107	MYB family protein